Em 31-05-2016 17:25, Szilárd Páll escreveu:
Hi,
Just because gcc 5.3 and CUDA/nvcc 7.5 are in some Ubuntu repos (partner
AFAIR), it does not mean they're automatically compatible. The NVIDIA
documentation clearly indicates they're not.
Surely the ubuntu cuda maintainers patched
On 26-04-2016 10:33, James Starlight wrote:
No, in my case it recognize ? like a ?
in script I have
for sim in ${HOME}/${tit}* ; do
if [[ -d $sim ]]; then
simulation=$(basename "$sim")
cd ${sim}
rm dd_dump_err*.pdb
trjconv -s md_${tit}?.tpr -f md_${tit}?.trr -o
On 08-12-2015 16:56, Szilárd Páll wrote:
Hi,
First obvious thing: v4.6.1 is severely outdated, so is the compiler used,
gcc 4.4.
Does 4.6.7 compiled with something more recent reproduce the issue?
No it doesn't, even with gcc 4.4 it runs fine, but the user requested
this specfic version
On 27-08-2015 04:17, Mark Abraham wrote:
Hi,
I have no idea what you're trying to show with these graphs. Your vertical
axis of time makes it looks like a 2.5 year old AMD chip is walking all
over POWER8?
Other points
1) GROMACS doesn't use configure or fortran, so don't mention that
This is
On 27-08-2015 10:03, Szilárd Páll wrote:
A few more things to add:
- we don't have CPU SIMD kernels for Power8, so comparing the plain C
kernels against AVX kernels on AMD is not exactly fair;
That was our hypothesis after seeing the results.
One of our goals was to assess the readiness of
Hello there
We've been testing gromacs-5.1-beta1 in an IBM POWER8. The input used is
'pme.mdp' within the .96 directory of the following benchmark:
ftp://ftp.gromacs.org/pub/benchmarks/water_GMX50_bare.tar.gz
The following link shows our results:
On 30-06-2015 18:45, Alex wrote:
Hey Mark,
Let me first try
http://www.r-tutor.com/gpu-computing/cuda-installation/cuda7.0-ubuntu
Somehow in a few tutorials people assumed that apt-get update/upgrade after
installing that deb package would automatically install CUDA, which does
not at all seem
