Re: [gmx-users] Neutralizing

2016-03-07 Thread Parham Jabbarzadeh (Department of Biomedical Science)
Dear Sir Use this command: gmx genion -s ions.tpr -o solv_ions.gro -p topol.top -neutral In this case, you don't need ​the number of ions​. Kind Regards Parham J. K. ** *​​* *==* *​==​* *=* ​PhD candidate - Lecturer in drug discovery Faculty of Medicine and Health Scie

[gmx-users] Installation problem

2015-09-26 Thread Parham Jabbarzadeh (Department of Biomedical Science)
Dear sir When I am installing in the build directory, I faced the folliwng error. Can you help me? My Ubuntu version is 15.04. Issue another request to this URL: 'https://kth.box.com/shared/static/53xl0qouhsvrbrbgtl4p.gz' Protocol "https" not supported or disabled in libcurl Closing conn