Re: [gmx-users] WHAM

2017-12-17 Thread Roja
Why you don't answer me?is there anything wrong in my question? Thank you Sent from my iPhone > On Dec 17, 2017, at 17:36, rose rahmani wrote: > > Hi, > > I try to use umbrella sampling for calculating PMF. i change distance > between protein and ZNS nanosheet. I use

Re: [gmx-users] Umbrella Sampling

2017-11-26 Thread Roja
Would you please tell me what is the difference between using umbrella in 4.5.x version and 5.1.4 version?are they different in ACCURACY of sampling? Sent from my iPhone > On Nov 26, 2017, at 21:14, Justin Lemkul wrote: > > > >> On 11/26/17 12:40 PM, rose rahmani wrote: >>

Re: [gmx-users] is there any special tutorial for the interaction of nanosheet and amino acids?

2017-10-18 Thread Roja
ng smaller box >> with periodic boundry condition(with out using vaccum gap),are they related >> to each other at all?!!! >> Sorry for these childish questions,but I really get confused. >> >> With regards >> Roja >> >> >>> On Oct 19, 2017, at 0:08,