Re: [gmx-users] (no subject)

2019-02-08 Thread Satya Ranjan Sahoo
Sir, Can anyone suggest how I can use ethanol force field to solvate and run MD for my molecule. Please help. On Thu 31 Jan, 2019, 10:48 AM Satya Ranjan Sahoo Sir, > I am a beginner to GROMACS. I was unable to understand how to create all > the ions.mdp , md.mdp , mout.mdp , min

[gmx-users] (no subject)

2019-01-30 Thread Satya Ranjan Sahoo
Sir, I am a beginner to GROMACS. I was unable to understand how to create all the ions.mdp , md.mdp , mout.mdp , minim.mdp , newbox.mdp , npt.mdp , nvt.mdp , porse.itp , topol.top input files for molecular simulation of my molecule. Please teach me how can I generate or create all the above