Hi,
Yes, that's a reasonable approach. Check out gmx select, if say you know
your center of membrane's z location, you can select for phosphates > that
center point, which will give you your top leaflet.
Kevin
On Tue, Mar 17, 2020 at 12:49 PM Poncho Arvayo Zatarain <
poncho_8...@hotmail.com>
Hello gromacs users: I want to obtain the lateral diffusion for a membrane with
approximately 55 lipids+ions (NA+Cl) but i want to this for each leaflet of the
membrane (outter and inner) and then obtain the average. I know that i can use
gmx msd for lateral diffusion, but i don know how to
