Re: [gmx-users] Acetonitrile using CHARMM ff

2017-07-11 Thread Justin Lemkul
On 7/10/17 10:52 AM, Sonia Milena Aguilera Segura wrote: Dear Justin, Thank you for the answer. I changed the two parameters suggested in the mdp file and I ran again a minimization, 200 ps NVT, 200 ps NPT, and 1 ns MD for the two cases of the previous mail, and now I am getting densities

Re: [gmx-users] Acetonitrile using CHARMM ff

2017-07-10 Thread Sonia Milena Aguilera Segura
Dear Justin, Thank you for the answer. I changed the two parameters suggested in the mdp file and I ran again a minimization, 200 ps NVT, 200 ps NPT, and 1 ns MD for the two cases of the previous mail, and now I am getting densities around 771 g/m3 which is slightly underestimated, but close