On 2/6/19 9:38 AM, Gyorgy Hantal wrote:
Hi,
I think you should be able to do that if there are (and I think there
should be) corresponding entries in the chramm/amber rtp file.
Neither AMBER nor CHARMM has methylated glutamine.
If this sounds alien to you, try find out what is the way to
Hi,
I think you should be able to do that if there are (and I think there
should be) corresponding entries in the chramm/amber rtp file.
If this sounds alien to you, try find out what is the way to generate
topologies from a residue database (e.g. gromacs manual or tutorials).
Hope this sounds
Dear all,
I want to do the MD simulation of a protein with methylated glutamine and
glutamic acid using CHARMM force field in GROMACS. Is it possible to get
the GROMACS supported topology file and the parameters for CHARMM or AMBETR
forcefield for methylated glutamine and glutamic acid.
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