Hello All, I ran a 10ns simulation on a wild and mutant type of a protein complex. Attached is the rmsf graph. "Green" is the mutant protein with mutation at residue 71 (marked) and "purple" is the wild protein. After looking at the graph can it be said that the mutant has made the complex more stable? How possible is this scenario? I am yet to do dssp analysis and h-bond analysis. Can someone tell me what other analysis can be useful for this case?
Thanks
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