Re: [gmx-users] Extracting Trajectory and False Simulation

2015-09-07 Thread João Henriques
07/09/2015 11:57 AM (GMT+05:45) > To: Discussion list for GROMACS users <gmx-us...@gromacs.org>,Rabindra > Raj Oliya <oliyarabin...@gmail.com> > Subject: Re: [gmx-users] Extracting Trajectory and False Simulation > > Hi Rabindra, > > You can do an mdrun -r

Re: [gmx-users] Extracting Trajectory and False Simulation

2015-09-07 Thread Rabindra Raj Oliya
15 11:57 AM (GMT+05:45) To: Discussion list for GROMACS users <gmx-us...@gromacs.org>,Rabindra Raj Oliya <oliyarabin...@gmail.com> Subject: Re: [gmx-users] Extracting Trajectory and False Simulation Hi Rabindra, You can do an mdrun -rerun with the original trajectory and the alt

Re: [gmx-users] Extracting Trajectory and False Simulation

2015-09-07 Thread Tsjerk Wassenaar
e: 07/09/2015 7:43 AM (GMT+05:45) > To: gmx-us...@gromacs.org > Subject: Re: [gmx-users] Extracting Trajectory and False Simulation > > > > On 9/6/15 9:54 PM, Rabindra Oliya wrote: > > Dear sir, > > I have to extract the configuration stored into the trajectory file

Re: [gmx-users] Extracting Trajectory and False Simulation

2015-09-06 Thread Rabindra Raj Oliya
: Justin Lemkul <jalem...@vt.edu> Date: 07/09/2015 7:43 AM (GMT+05:45) To: gmx-us...@gromacs.org Subject: Re: [gmx-users] Extracting Trajectory and False Simulation On 9/6/15 9:54 PM, Rabindra Oliya wrote: > Dear sir, > I have to extract the configuration stored into the tra

Re: [gmx-users] Extracting Trajectory and False Simulation

2015-09-06 Thread Justin Lemkul
On 9/6/15 9:54 PM, Rabindra Oliya wrote: Dear sir, I have to extract the configuration stored into the trajectory file and carry out the false simulation (in which we set up just one MD step and a 0.0 time step) using the topology file. How can be this done? Why bother? A single step in

[gmx-users] Extracting Trajectory and False Simulation

2015-09-06 Thread Rabindra Oliya
Dear sir, I have to extract the configuration stored into the trajectory file and carry out the false simulation (in which we set up just one MD step and a 0.0 time step) using the topology file. How can be this done? -- Gromacs Users mailing list * Please search the archive at