Re: [gmx-users] Inconsistency in user input:

2018-08-02 Thread Mark Abraham
Hi, Things like multiple energy groups have never been supported on GPUs. Old versions of GROMACS ran them anyway, filling most energy groups values with zeros, if I recall correctly. However, that behaviour is somewhere between rather surprising and wrong (since you specified -nb gpu), so now mdr

[gmx-users] Inconsistency in user input:

2018-08-02 Thread Atila Petrosian
With gmx_mpi mdrun -v -deffnm nvt_pr, there is not error. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit

[gmx-users] Inconsistency in user input:

2018-08-02 Thread Atila Petrosian
Dear gromacs users, I am doing md simulation (nvt equilibration step) using gromacs version 2018.2. After using (gmx_mpi mdrun -v -deffnm nvt_pr -nb gpu), I encountered with: Program: gmx mdrun, version 2018.2 Source file: src/gromacs/taskassignment/decidegpuusage.cpp (line 292) Function: