Re: [gmx-users] Installation error

2018-03-24 Thread Mark Abraham
Hi, No. You said you have fftw 3.3.7 so just let the cmake you have use it :-) Mark On Sat, Mar 24, 2018, 18:49 ali akgün wrote: > Should i use another version of cmake ? > On Sat, Mar 24, 2018 at 3:05 PM, Mark Abraham > wrote: > > > Hi, > >

Re: [gmx-users] Installation error

2018-03-24 Thread ali akgün
Should i use another version of cmake ? On Sat, Mar 24, 2018 at 3:05 PM, Mark Abraham wrote: > Hi, > > If you have fftw 3.3.7, then you don't need to ask the GROMACS build system > to download and build fftw for you. The error is suggesting that the issue > is that your

Re: [gmx-users] Installation error

2018-03-24 Thread Mark Abraham
Hi, If you have fftw 3.3.7, then you don't need to ask the GROMACS build system to download and build fftw for you. The error is suggesting that the issue is that your CMake build wasn't configured to be able to do the download that your asking GROMACS to ask CMake to do. Mark On Sat, Mar 24,

[gmx-users] Installation error

2018-03-24 Thread ali akgün
Hello, I got an error in gromacs-5.0.7 installiation cmake part. My error is: Scanning dependencies of target fftwBuild Scanning dependencies of target mdrun_objlib Scanning dependencies of target view_objlib [ 0%] Performing pre-download step for 'fftwBuild' [ 0%] Creating directories for

Re: [gmx-users] installation error

2018-03-21 Thread Mark Abraham
Hi, Your CMake installation is broken. You should probably install it again, depending how you did it last time. Mark On Wed, Mar 21, 2018, 16:39 ali akgün wrote: > Hello, > > I got an error in gromacs-5.1.5 installiation cmake part. > > My error is: > > *** glibc

[gmx-users] installation error

2018-03-21 Thread ali akgün
Hello, I got an error in gromacs-5.1.5 installiation cmake part. My error is: *** glibc detected *** cmake: free(): invalid pointer: 0x009f241d *** How to fix this error? Thank you. -- Gromacs Users mailing list * Please search the archive at

Re: [gmx-users] installation error gromacs-imd

2016-06-09 Thread Andrian Saputra
Thanks Mark... Pada tanggal 9 Jun 2016 18.58, "Mark Abraham" menulis: > Hi, > > Please use a released version of GROMACS and don't smash your OS by running > make with sudo. Then we can consider problems that may arise :-) > > Mark > > On Thu, 9 Jun 2016 11:30 Andrian

Re: [gmx-users] installation error gromacs-imd

2016-06-09 Thread Mark Abraham
Hi, Please use a released version of GROMACS and don't smash your OS by running make with sudo. Then we can consider problems that may arise :-) Mark On Thu, 9 Jun 2016 11:30 Andrian Saputra wrote: > Hi..May be its not a gromacs master.. > But i think there is no

Re: [gmx-users] installation error gromacs-imd

2016-06-09 Thread Andrian Saputra
Hi..May be its not a gromacs master.. But i think there is no problem with source Pada tanggal 9 Jun 2016 15.48, "Kutzner, Carsten" menulis: > > > On 09 Jun 2016, at 09:33, Andrian Saputra > wrote: > > > > Hi,, > > > > Ya i hve tried to install version

Re: [gmx-users] installation error gromacs-imd

2016-06-09 Thread Kutzner, Carsten
> On 09 Jun 2016, at 09:33, Andrian Saputra wrote: > > Hi,, > > Ya i hve tried to install version 5.0 and all compilation is ok... but i > familiar with version 4.5, 4.6... version 5.0 need some changes in mdp > file... But isn't this the master version of GROMACS that

Re: [gmx-users] installation error gromacs-imd

2016-06-09 Thread Andrian Saputra
Hi,, Ya i hve tried to install version 5.0 and all compilation is ok... but i familiar with version 4.5, 4.6... version 5.0 need some changes in mdp file... Do you have idea about the error ?? Thank you Pada tanggal 9 Jun 2016 14.16, "Kutzner, Carsten" menulis: > Hi, > > the

Re: [gmx-users] installation error gromacs-imd

2016-06-09 Thread Kutzner, Carsten
Hi, the error message you see has nothing to do with IMD. Have you tried to install a Gromacs 5.0 or 5.1 or 2016 version? These should all work out of the box with IMD. Best, Carsten > On 09 Jun 2016, at 04:35, Andrian Saputra wrote: > > Dear gromacs users > > i

[gmx-users] installation error gromacs-imd

2016-06-08 Thread Andrian Saputra
Dear gromacs users i was trying to install gromacs-imd that was developed by Martin Hoefling http://www.mpibpc.mpg.de/grubmueller/interactivemd all configuration is ok with this command: CC=$HOME/software/openmpi/bin/mpicc CXX=$HOME/software/openmpi/bin/mpicxx

Re: [gmx-users] Installation Error

2015-04-11 Thread Justin Lemkul
On 4/11/15 9:19 AM, su wrote: Dear All I am trying to install Gromacs on ubuntu. I have followed the quick and dirty tutorial but when i untar the gromacs-4.6.4.tar.gz file it gives error that no such file ir directory. File is located in the system , i dont know why it is happening. please

[gmx-users] Installation Error

2015-04-11 Thread su
Dear All I am trying to install Gromacs on ubuntu. I have followed the quick and dirty tutorial but when i untar the gromacs-4.6.4.tar.gz file it gives error that no such file ir directory. File is located in the system , i dont know why it is happening. please help Regards Su Sent from my