Re: [gmx-users] Is charmm GUI ideal for membrane building

2016-06-13 Thread Tsjerk Wassenaar
.com> > Sent: Monday, June 13, 2016 7:44:03 AM > To: Discussion list for GROMACS users > Subject: Re: [gmx-users] Is charmm GUI ideal for membrane building > > Hi Amit, > > What membrane and what time scale are you talking about? Complex membranes > may take microsecond

Re: [gmx-users] Is charmm GUI ideal for membrane building

2016-06-13 Thread Sotirios Dionysios I. Papadatos
<tsje...@gmail.com> Sent: Monday, June 13, 2016 7:44:03 AM To: Discussion list for GROMACS users Subject: Re: [gmx-users] Is charmm GUI ideal for membrane building Hi Amit, What membrane and what time scale are you talking about? Complex membranes may take microseconds to equilibrate. Cheers, Tsje

Re: [gmx-users] Is charmm GUI ideal for membrane building

2016-06-12 Thread Tsjerk Wassenaar
Hi Amit, What membrane and what time scale are you talking about? Complex membranes may take microseconds to equilibrate. Cheers, Tsjerk On Jun 13, 2016 06:13, wrote: > Hello everyone, > I built a lipid membrane in Charmm-GUI and tried to equilibrate it in >

[gmx-users] Is charmm GUI ideal for membrane building

2016-06-12 Thread amitbehra
Hello everyone, I built a lipid membrane in Charmm-GUI and tried to equilibrate it in GROMACS 5.1.2. But the total energy goes on decreasing. Is it normal or should I try building the membrane by other methods. Thanks in advance, Amit Behera -- This message has been scanned for viruses and