Re: [gmx-users] Job Submission script for Multiple nodes GPUs calculation

2014-08-21 Thread Carsten Kutzner
Hi, On 22 Aug 2014, at 01:38, Xingcheng Lin wrote: > Good afternoon, > > I am trying to use multiple nodes to do GPU simulation, each node has two > GPUs and 12 CPUs mounted. Is there any submission script for doing that? > > For single node I used: > > mpiexec -np 2 mdrun_mpi -s run.tpr -cpi

[gmx-users] Job Submission script for Multiple nodes GPUs calculation

2014-08-21 Thread Xingcheng Lin
Good afternoon, I am trying to use multiple nodes to do GPU simulation, each node has two GPUs and 12 CPUs mounted. Is there any submission script for doing that? For single node I used: mpiexec -np 2 mdrun_mpi -s run.tpr -cpi state.cpt -cpo state.cpt -noappend -gpu_id 01 -nb gpu -ntomp 6 For 2