Re: [gmx-users] NA or SOD in CHARMM36

2016-04-21 Thread Justin Lemkul
On 4/21/16 4:56 AM, Jason Loo Siau Ee wrote: Hi all, I'm trying to simulate a protein-ligand complex in POPC membrane using the CHARMM36 forcefield, which I got from the Mackerell site and included in /share/gromacs/top/. Now when I run grompp I get the error "Fatal error: No such

[gmx-users] NA or SOD in CHARMM36

2016-04-21 Thread Jason Loo Siau Ee
Hi all, I'm trying to simulate a protein-ligand complex in POPC membrane using the CHARMM36 forcefield, which I got from the Mackerell site and included in /share/gromacs/top/. Now when I run grompp I get the error "Fatal error: No such moleculetype SOD" despite the fact that I have #include