Hello Gmx Users,
As suggested previously in this thread, I tried to use enforced rotations
on my system. First I calculated the amount of domain rotation and
translation required to obtain conformation 2 from conformation 1 using
'measure rotation' tool in chimera. I received an output as below:
Abhishek Acharya
Shasara Research Foundation
On Tue, Dec 30, 2014 at 10:42 AM, Justin Lemkul jalem...@vt.edu wrote:
On 12/29/14 11:34 AM, Abhi Acharya wrote:
On Mon, Dec 29, 2014 at 8:59 PM, Justin Lemkul jalem...@vt.edu wrote:
On 12/29/14 6:57 AM, Abhi Acharya wrote:
Hello GROMACS
Hello GROMACS Users,
This is a problem I am facing for the first time. Kindly guide be to the
best options.
I have a protein which has two large domains connected by a flexible linker
peptide (~10 aa). The two domains seem to interact with each other and have
been crystallized in three different
On 12/29/14 6:57 AM, Abhi Acharya wrote:
Hello GROMACS Users,
This is a problem I am facing for the first time. Kindly guide be to the
best options.
I have a protein which has two large domains connected by a flexible linker
peptide (~10 aa). The two domains seem to interact with each other
On Mon, Dec 29, 2014 at 8:59 PM, Justin Lemkul jalem...@vt.edu wrote:
On 12/29/14 6:57 AM, Abhi Acharya wrote:
Hello GROMACS Users,
This is a problem I am facing for the first time. Kindly guide be to the
best options.
I have a protein which has two large domains connected by a flexible
On 12/29/14 11:34 AM, Abhi Acharya wrote:
On Mon, Dec 29, 2014 at 8:59 PM, Justin Lemkul jalem...@vt.edu wrote:
On 12/29/14 6:57 AM, Abhi Acharya wrote:
Hello GROMACS Users,
This is a problem I am facing for the first time. Kindly guide be to the
best options.
I have a protein which
