Re: [gmx-users] RMSD Matrix Error

2017-06-07 Thread Mark Abraham
which > frames to use? > > > > Message: 2 > Date: Mon, 05 Jun 2017 01:37:37 + > From: Mark Abraham <mark.j.abra...@gmail.com> > To: gmx-us...@gromacs.org, gromacs.org_gmx-users@maillist.sys.kth.se > Subject: Re: [gmx-users] RMSD Matrix error > Message-ID: >

Re: [gmx-users] RMSD Matrix Error

2017-06-06 Thread Apramita Chand
? Message: 2 Date: Mon, 05 Jun 2017 01:37:37 + From: Mark Abraham <mark.j.abra...@gmail.com> To: gmx-us...@gromacs.org, gromacs.org_gmx-users@maillist.sys.kth.se Subject: Re: [gmx-users] RMSD Matrix error Message-ID:

Re: [gmx-users] RMSD Matrix error

2017-06-04 Thread Mark Abraham
Hi, On Sun, Jun 4, 2017 at 4:08 PM Apramita Chand wrote: > Dear All, > > When I'm trying to construct a RMSD matrix , using the command > g_rms -s protein_equili.gro -f protein_model1_ut.xtc -m > rmsd-matrix.xpm -tu ns > > I get the error: > Last frame

[gmx-users] RMSD Matrix error

2017-06-04 Thread Apramita Chand
Dear All, When I'm trying to construct a RMSD matrix , using the command g_rms -s protein_equili.gro -f protein_model1_ut.xtc -m rmsd-matrix.xpm -tu ns I get the error: Last frame 20 time 20.000 Building RMSD matrix, 21x21 elements element 28982; time 2.90 Killed I