Moreover, this protein has ATP molecule also meaning it is a three molecule
complex.
On Tue, 22/1/19, Dr. Seema Mishra wrote:
Subject: Re: [gmx-users] RMSD plots protein-protein complex
To: gmx-us...@gromacs.org
Date: Tuesday, 22 January, 2019
wrote:
Subject: Re: [gmx-users] RMSD plots protein-protein complex
To: gmx-us...@gromacs.org
Date: Sunday, 20 January, 2019, 8:05 PM
On 1/18/19 11:55 AM, marzieh gharouni wrote:
> Hello
> I did a
simulation of protein-protein interaction with Gromacs code.
In
> this s
On 1/18/19 11:55 AM, marzieh gharouni wrote:
Hello
I did a simulation of protein-protein interaction with Gromacs code. In
this simulation, the number of amino acids in each protein is about 230.
The simulation production run was 300ns. After analyzing trajectory, I
found that RMSD value of
Hello
I did a simulation of protein-protein interaction with Gromacs code. In
this simulation, the number of amino acids in each protein is about 230.
The simulation production run was 300ns. After analyzing trajectory, I
found that RMSD value of protein-protein complex fluctuated near 1.8 nm but
