Re: [gmx-users] Select one molecule closest to another molecule for all snapshots

2019-02-15 Thread Justin Lemkul
On 2/15/19 4:10 AM, Apramita Chand wrote: Dear Gromacs Users, I have two kinds of molecules in my system. I want to know the coordinates of the molecule A that is found closest to molecule B at every snapshot of the MD trajectory. I am using gromacs 5.1. I dont have a cutoff, I just want to ge

[gmx-users] Select one molecule closest to another molecule for all snapshots

2019-02-15 Thread Apramita Chand
Dear Gromacs Users, I have two kinds of molecules in my system. I want to know the coordinates of the molecule A that is found closest to molecule B at every snapshot of the MD trajectory. I am using gromacs 5.1. I dont have a cutoff, I just want to generate coordinates of the single one molecule