Thanks for your response! I checked and the cg_traj file contains atoms
numbered 1-2000, which matches the atom IDs from the index file. The same
trajectory does work using gmx angle with an angle index file created from the
same python script which also includes atom IDs 1-2000 as well.
Hi,
On Tue, Jan 14, 2020 at 7:41 PM Travis Meyer
wrote:
> Hello all,
>
> I am a brand new MD/GROMACS user, and I have been trying to learn how to
> use GROMACS for coarse-grained simulations using the MARTINI forcefield. I
> was going through a tutorial on coarse-graining from the MARTINI
Hello all,
I am a brand new MD/GROMACS user, and I have been trying to learn how to use
GROMACS for coarse-grained simulations using the MARTINI forcefield. I was
going through a tutorial on coarse-graining from the MARTINI website
