Re: [gmx-users] high-temperature MD

2016-10-07 Thread OuyangYanhua
0 K, so NPT at 380 K is certainly possible. > > > From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se > on behalf of Justin > Lemkul > Sent: 06 October 2016 09:34:49 > To: gmx-us...@gromacs.org > Subject: Re: [gmx-users] high-t

Re: [gmx-users] high-temperature MD

2016-10-06 Thread Christopher Neale
_gmx-users-boun...@maillist.sys.kth.se on behalf of Justin Lemkul Sent: 06 October 2016 09:34:49 To: gmx-us...@gromacs.org Subject: Re: [gmx-users] high-temperature MD On 10/6/16 8:54 AM, OuyangYanhua wrote: > Dear Justin, >> > I had run a 300K-MD, now I want to run a high-temperature(380K

Re: [gmx-users] high-temperature MD

2016-10-06 Thread Justin Lemkul
On 10/6/16 8:54 AM, OuyangYanhua wrote: Dear Justin, I had run a 300K-MD, now I want to run a high-temperature(380K) MD to compare with the 300K-MD. The 300K is first equilibrated at NVT, then at NPT and production MD at NPT. So I want to know the high-temperature(380K) MD should run the s

Re: [gmx-users] high-temperature MD

2016-10-06 Thread OuyangYanhua
Dear Justin, > I had run a 300K-MD, now I want to run a high-temperature(380K) MD to compare with the 300K-MD. The 300K is first equilibrated at NVT, then at NPT and production MD at NPT. So I want to know the high-temperature(380K) MD should run the same as the 300k, which means the 380k is al

Re: [gmx-users] high-temperature MD

2016-10-06 Thread Justin Lemkul
On 10/6/16 3:52 AM, YanhuaOuyang wrote: Hi, I want to perform a MD of an IDP, whose temperature is set to 380K. As we know, the MD is equilibrated firstly at NVT, then at NPT ensemble and production MD at NPT ensemble normally. Does someone know whether the 380K-MD can only perform at NVT e

[gmx-users] high-temperature MD

2016-10-06 Thread YanhuaOuyang
Hi, I want to perform a MD of an IDP, whose temperature is set to 380K. As we know, the MD is equilibrated firstly at NVT, then at NPT ensemble and production MD at NPT ensemble normally. Does someone know whether the 380K-MD can only perform at NVT ensemble since the temperature(380K) is a