Re: [gmx-users] pdb2gmx error with addition of terminal group

Thanks Justin. Its working fine. On Wed, Jul 8, 2015 at 12:32 PM, Justin Lemkul wrote: > > > On 7/8/15 6:39 AM, anu chandra wrote: > >> Dear Gromacs users, >> >> I am trying to use pdb2gmx tool to generate topology for my membrane >> protein system with chamrm36 force field. I have downloaded Gr

Re: [gmx-users] pdb2gmx error with addition of terminal group

On 7/8/15 6:39 AM, anu chandra wrote: Dear Gromacs users, I am trying to use pdb2gmx tool to generate topology for my membrane protein system with chamrm36 force field. I have downloaded Gromacs compatible Chamrmm36ff from http://mackerell.umaryland.edu/charmm_ff.shtml#gromacs. I build the N-t

[gmx-users] pdb2gmx error with addition of terminal group

Dear Gromacs users, I am trying to use pdb2gmx tool to generate topology for my membrane protein system with chamrm36 force field. I have downloaded Gromacs compatible Chamrmm36ff from http://mackerell.umaryland.edu/charmm_ff.shtml#gromacs. I build the N-terminal acetyl (ACE) and C-terminal N-met