Re: [gmx-users] regarding SwissParam topology

2015-06-11 Thread Justin Lemkul
On 6/10/15 9:22 AM, soumadwip ghosh wrote: Thanks Justin, actually I did look into what you suggested. I made a carbon nanotube topology with the help of pbd2gmx. Now, the atomtypes specified in the .rtp file was CA as it is aromatic carbon atoms. Then I looked into the

[gmx-users] Regarding SwissParam topology

2015-06-09 Thread soumadwip ghosh
Hi, I have a question about the topology made by SwissParam which is compatible with CHARMM 27 force field. I hate to bring the same thing up again and again but I am really doubtful about some of the parameters created by the above mentioned web server. I have built a topology for fullerene