Hi all, I have a oil slab and want to insert a protein so that almost half of the protein is inserted into the oil and the other half is outside in the vacuum. Is there any tools in Gromacs so that I can easily remove some of the oil atoms and make a space for the protein insertion? My apology if it seems a trivial question.
Cheers, James -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
