Re: [gmx-users] QM-MM (sai manohar)

2018-05-28 Thread sai manohar
Thank you for the guidance. I shall browse through for other alternatives. :) On Mon, May 28, 2018 at 6:14 PM, Groenhof, Gerrit wrote: > Hi, > > Unfortunately, for this to work > you need to have both heme and protein in one topology. > > best, > > gerrit > > Tidings and a good day. > > Hi, >

Re: [gmx-users] QM-MM (sai manohar)

2018-05-28 Thread Groenhof, Gerrit
Hi, Unfortunately, for this to work you need to have both heme and protein in one topology. best, gerrit Tidings and a good day. Hi, I'm looking at a QM-MM/Gromacs optimization for a Heme-CYP system. How do I take it forward. I've found one strategy using a dummy atom in linker. However,