Re: [gmx-users] Gromos96 53a6 and Berger Lipids

Hi Tom, hi all, thanks a lot for your answer, it helped a lot. Regarding the issues with some of the other lipid parameters provided in the Kukol paper (POPC/POPG parameters), I would be happy if you could point me to the papers you have in mind. Best regards and have a nice day, Moritz

[gmx-users] Gromos96 53a6 and Berger Lipids

Hi all, I would appreciate your opinion on a quite often discussed topic. I am doing simulations of triglycerides and phosphoglycerides, and I am currently using the combination of gromos96 53a6 and Berger Lipid parameters as suggested in Justin Lemkuls Tutorial. If I am right, this

[gmx-users] Triglycerides: Berger Lipids and Kukol Lipids

Hi all, I am currently doing simulations of triglycerides with the Berger parameters. Therefore, I built my topology files based on a phospholipid-file (in my case dppc.itp) from Peter Tielemans homepage (http://wcm.ucalgary.ca/tieleman/downloads). That means, I had to replace all