Re: [gmx-users] regarding generation of a topology file using Topolbuild

2014-10-09 Thread Bruce D. Ray
to save mol2 files, but with these, the type of the guanidino carbon of arginine needs to be changed to C.cat to meet the Sybyl mol2 specifications. Sincerely, -- Bruce D. Ray, Ph.D. Associate Scientist IUPUI Physics Dept. 402 N. Blackford St., Rm. LD-061 Indianapolis, IN 46202-3273 -- Gromacs

[gmx-users] I am still being regularly unsubscribed from the gromacs.org mailing list

2014-06-10 Thread Bruce D. Ray
do not believe that I have done anything wrong on the mailing list. What is causing this? What do I need to do to stop this from taking place? -- Bruce D. Ray, Ph.D. Associate Scientist IUPUI Physics Dept. 402 N. Blackford St. Indianapolis, IN  46202-3273  -- Gromacs Users mailing list

[gmx-users] I keep receiving messages that I have been unsubscribed from the mailing list.

2014-05-12 Thread Bruce D. Ray
have done anything wrong on the mailing list.  What is causing this? -- Bruce D. Ray, Ph.D. Associate Scientist IUPUI Physics Dept. 402 N. Blackford St. Indianapolis, IN  46202-3273  -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support

Re: [gmx-users] topolbuild

2014-05-05 Thread Bruce D. Ray
to add the appropriate line, terminated by an end of line, to your file. I hope that helps. -- Bruce D. Ray, Ph.D. Associate Scientist IUPUI Physics Dept. 402 N. Blackford St. Indianapolis, IN 46202-3273 -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support

Re: [gmx-users] how to add parameters to Topolbuild

2014-01-02 Thread Bruce D. Ray
. -- Bruce D. Ray, Ph.D. Associate Scientist IUPUI Physics Dept. 402 N. Blackford St. Indianapolis, IN 46202-3273 -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org