Hi,
Indeed, the standard way provided by CUDA to expose a subset of GPUs to an
application is the CUDA_VISIBLE_DEVICES (note the "S" ending); I did not
realize that is something you were interested in, I thought you wanted to
avoid using GPUs.
Also note (for anyone interested), a when using a
Hi,
Thanks, setting this variable allowed me to start GROMACS without errors
using the CPU.
The problem is that this method prevents me from using other free GPUs on
the host, but I would like to do this.
I also found out that setting the CUDA_VISIBLE_DEVICE variable to available
GPUs at the time
Hi,
This is an issue in one of pre-detection checks that trips due to
encountering exclusive / prohibited mode devices.
You can work around this by entirely disabling the detection using the
GMX_DISABLE_GPU_DETECTION environment variable.
Cheers,
--
Szilárd
On Thu, Oct 17, 2019 at 5:01 PM
Hi,
Can you please file an issue on redmine.gromacs.org with the description
you gave here?
Thanks,
--
Szilárd
On Thu, Oct 17, 2019 at 5:01 PM Artem Shekhovtsov
wrote:
> Hello!
> Problem: The launch of mdrun that does not require video cards exit with
> fatal error if at least one video card
Hello!
Problem: The launch of mdrun that does not require video cards exit with
fatal error if at least one video card is busy on the host at that time.
gmx mdrun -deffnm test -ntmpi 1 -ntomp 1 -nb cpu -bonded cpu
---
Program: gmx mdrun,
