Thanks David for the clarifications. I really appreciate it.Atanu
On Friday, 13 March 2015 2:07 AM, David van der Spoel
sp...@xray.bmc.uu.se wrote:
On 2015-03-13 00:30, atanu das wrote:
Hi David, I have checked both the codes, g_angle.c and g_chi.c, and the same
Cos function is
On 2015-03-13 00:30, atanu das wrote:
Hi David, I have checked both the codes, g_angle.c and g_chi.c, and the same Cos
function is used in both the cases (please correct me if I am wrong). g_angle
analysis: I have used the following command to calculate the average
autocorrelation function
On 2015-03-12 19:03, atanu das wrote:
Hi again,
Just to add a note ---
It seems that g_angle can also calculate the dihedral angle autocorrelation
function with the option -oc. Does this program use the same functional form as
g_chi i.e. is the functions defined as ---
C(t) = cos(theta(tau))
Hi again,
Just to add a note ---
It seems that g_angle can also calculate the dihedral angle autocorrelation
function with the option -oc. Does this program use the same functional form as
g_chi i.e. is the functions defined as ---
C(t) = cos(theta(tau)) cos(theta(tau+t))
ThanksAtanu
On
Hi David, I have checked both the codes, g_angle.c and g_chi.c, and the same
Cos function is used in both the cases (please correct me if I am wrong).
g_angle analysis: I have used the following command to calculate the average
autocorrelation function (ACF) over all the backbone phi psi
Hi All,
As Prof. David van der Spoel referred in the last communication about how the
dihedral angle autocorrelation function is calculated via the program g_chi, I
have a query regarding the differences that I found between the function
mentioned in the article (Biophys. J. 72 pp. 2032-2041
