Hi all, Does anyone know the instrumentation tool Vampir Trace? I am using it, and I want to instrument the gromacs code. So my cmake options are:
cmake .. -DCMAKE_BUILD_OWN_FFTW=ON -DCMAKE_C_COMPILER=vtcc -DCMAKE_CXX_COMPILER=vtcxx -DGMX_MPI=on -DCMAKE_INSTALL_PREFIX=/home/theo/gmx -CUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda-5.5 Vampir Trace includes some binaries, like vtcc and vtcxx above. They behave like compiler but are actually compiler wrapper. For example, you can write main.c and vtcc main.c -o main, and the binary main will be built and you can run it like a normal binary file, but during the run, some files will be generated and can be analysed latter. However, error occurs: [ 2%] Building C object src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/tng_compress.c.o /home/theo/gromacs-5.0/src/external/tng_io/src/compression/tng_compress.c:25: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘speed’ /home/theo/gromacs-5.0/src/external/tng_io/src/compression/tng_compress.c: In function ‘quantize’: /home/theo/gromacs-5.0/src/external/tng_io/src/compression/tng_compress.c:80: warning: implicit declaration of function ‘verify_input_data’ At top level: cc1: warning: unrecognized command line option "-Wno-maybe-uninitialized" make[2]: *** [src/gromacs/CMakeFiles/libgromacs.dir/__/external/tng_io/src/compression/tng_compress.c.o] Error 1 make[1]: *** [src/gromacs/CMakeFiles/libgromacs.dir/all] Error 2 make: *** [all] Error 2 When I open the tng_compress.c, I find that line 25 is just a comment. 24 #define SPEED_DEFAULT 2 /* Default to relatively fast compression. For very good compression it makes sense to 25 choose speed=4 or speed=5 */ 26 Could you tell me what's going on? I'd appreciate you kind help. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
