Hi,
You need to try all the possibilities and find out what combinations gives
you the best. Further, I don't think you can achieve anything good with 8
logical processors for 'medium' protein or MD system.
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Hi,
How to get good (and fast) performance from mdrun through available 8
logical CPU cores?
When I gave,
gmx mdrun -ntmpi 2 -ntomp 4 -v -deffnm eq
It seems to be slow, much slower than
gmx mdrun -v -deffnm eq.
Can anyone help?
Thanks,
Vidya R
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