Re: [gmx-users] Pdb2gmx melts molecules due to bad distances

2017-11-28 Thread GIANMARCO BARTALINI
Thanks, but it doesn't work. Same problem. Gianmarco Bartalini Il 27 nov 2017 14:37, "Justin Lemkul" ha scritto: > > > On 11/27/17 6:04 AM, GIANMARCO BARTALINI wrote: > >> Hello guys, I produced a system "protein + lipid membrane" using the >> online >> tool CHARMM-GUI. Since

Re: [gmx-users] Pdb2gmx melts molecules due to bad distances

2017-11-27 Thread Justin Lemkul
On 11/27/17 6:04 AM, GIANMARCO BARTALINI wrote: Hello guys, I produced a system "protein + lipid membrane" using the online tool CHARMM-GUI. Since I need to use the Amber force field, I added the Lipids17 force field inside Gromacs. The implementation should work fine, since the conversion of

[gmx-users] Pdb2gmx melts molecules due to bad distances

2017-11-27 Thread GIANMARCO BARTALINI
Hello guys, I produced a system "protein + lipid membrane" using the online tool CHARMM-GUI. Since I need to use the Amber force field, I added the Lipids17 force field inside Gromacs. The implementation should work fine, since the conversion of an equilibrated structure produces a nice and