Re: [gmx-users] Problem reading pdb files

Hi, I imagine that at least one of the trajectories did not have a good PCA analysis because you probably want both trajectories such that molecules are whole with respect to PBC. The frame from the second trajectory is not. There's a useful workflow at

[gmx-users] Problem reading pdb files

Hi all, I have two pdb files extracted from two trajectories of same compound but starting from two different configurations. I wanted to combined the two trajectories but I faced a broken structures behaviour while combining the two ensembles. I just attached two first frames of each

[gmx-users] Problem reading pdb files

Hi all, I have two pdb files extracted from two trajectories of same compound but starting from two different configurations. I wanted to combined the two trajectories but I faced a broken structures behaviour while combining the two ensembles. I just attached two first frames of each