Hello,
I have simulated amino acid (eg., glycine) with water solvent mixture in
gromacs..
my question is ..
1] How can i find out the solvent orientation (angle made) ie.,angle made
by water (HOH) with respect to alpha carbon of amino acid (eg.,
glycine)...??
2] I have tried with gmx sorient comma
Hello,
I have simulated amino acid (eg., glycine) with water solvent mixture in
gromacs..
my question is ..
1] How can i find out the solvent orientation (angle made) ie.,angle made
by water (HOH) with respect to alpha carbon of amino acid (eg.,
glycine)...??
2] I have tried with gmx sorient comma