Thank you for your suggestions.
I followed your instruction and applied potential modifier during energy
minimization. However, the problem still persists.
Please suggest what to do.
On 9/26/14 5:34 AM, GAYATHRI S wrote:
Hello everyone,
I'm running a simulation with Verlet scheme (for
On 10/8/14 2:26 AM, GAYATHRI S wrote:
Thank you for your suggestions.
I followed your instruction and applied potential modifier during energy
minimization. However, the problem still persists.
Please suggest what to do.
OK, so there's simply a problem with input checking in grompp.
Hello everyone,
I'm running a simulation with Verlet scheme (for GPU).
I've used cut-off method for van der Waals interactions and PME for
electrostatic interactions. For energy minimization, I used steepest
descent, conjugate gradient and l-bfgs sequentially. However, when I come
to BFGS
On 9/26/14 5:34 AM, GAYATHRI S wrote:
Hello everyone,
I'm running a simulation with Verlet scheme (for GPU).
I've used cut-off method for van der Waals interactions and PME for
electrostatic interactions. For energy minimization, I used steepest
descent, conjugate gradient and l-bfgs