Re: [gmx-users] compile with intel compiler

2020-03-27 Thread Rolly Ng
ailto%3aharry.greenblatt%40weizmann.ac.il> > > Weizmann Institute of SciencePhone: 972-8-934-3625 > > 234 Herzl St.Facsimile: 972-8-934-4159 > > Rehovot, 76100 > > Israel > > > > From: gromacs

Re: [gmx-users] compile with intel compiler

2020-03-26 Thread Schulz, Roland
s-boun...@maillist.sys.kth.se > On Behalf Of Harry > Mark Greenblatt > Sent: Thursday, March 26, 2020 12:11 AM > To: gmx-us...@gromacs.org > Subject: Re: [gmx-users] compile with intel compiler > > BS"D > > > Yes, indeed, that was the error. I did try to define the

Re: [gmx-users] compile with intel compiler

2020-03-26 Thread Harry Mark Greenblatt
org Subject: Re: [gmx-users] compile with intel compiler Hi, Are you referring to this type of error: -- Performing Test USING_LIBSTDCXX -- Performing Test USING_LIBSTDCXX - Success CMake Error at cmake/FindLibStdCpp.cmake:119 (message): Found g++ at /usr/bin/g++. Its version is 4.8.5. GROMA

Re: [gmx-users] compile with intel compiler

2020-03-25 Thread Schulz, Roland
arch 25, 2020 3:46 AM > To: gmx-us...@gromacs.org > Subject: [gmx-users] compile with intel compiler > > BS”D > > Dear All, > > I would like to compile Gromacs 2020 with an intel compiler; I set the > following: > > -DCMAKE_C_COMPILER=icc -DCMAKE_CXX_COMPILE

Re: [gmx-users] compile with intel compiler

2020-03-25 Thread Lyudmyla Dorosh
Dear Harry, I'm not an expert, but before running gromacs install I "sourced" all Intel libraries, and specified SIMD for my processor: source /opt/intel/bin/compilervars.sh intel64 source /opt/intel/impi/2019.5.281/intel64/bin/mpivars.sh source /opt/intel/mkl/bin/mklvars.sh intel64 sudo cmake

[gmx-users] compile with intel compiler

2020-03-25 Thread Harry Mark Greenblatt
BS”D Dear All, I would like to compile Gromacs 2020 with an intel compiler; I set the following: -DCMAKE_C_COMPILER=icc -DCMAKE_CXX_COMPILER=icpc -DGMX_MPI=on -DGMX_BUILD_OWN_FFTW=OFF -DGMX_FFT_LIBRARY=mkl -DMKL_LIBRARIES=$MKLROOT/lib/intel64 -DMKL_INCLUDE_DIR=$MKLROOT/include Despite