Re: [gmx-users] thread-MPI compatibility requirement?

2018-08-15 Thread Kevin Boyd
Hi, This isn't a problem. Thread-mpi is the built-in mpi parallelization packaged with gromacs. What that message is saying is that Gromacs will use the openmpi library on your system instead, which is what you want when running on multiple nodes. Kevin On Wed, Aug 15, 2018 at 1:50 PM, Jost,

[gmx-users] thread-MPI compatibility requirement?

2018-08-15 Thread Jost, Gabriele (ARC-TNC)[Supersmith]
Hello, I would like to install GROMACS on a cluster of Volta nodes. I have openmpi_3.1.1 and pgi_openmpi_2.1.2 available. For of them I get the message -- MPI is not compatible with thread-MPI. Disabling thread-MPI. However, I really would like to have this to take advantage of all 8 GPUs Have