Re: [gmx-users] Pulling two groups in opposite direction

2018-05-18 Thread Justin Lemkul
On 5/18/18 6:34 AM, Naba wrote: On 5/17/18 1:39 AM, Naba wrote: On 5/16/18 3:32 AM, Naba wrote: Dear all, I am using gromacs 5.1.2 and trying to pull both monomers of 128 amino acids from its homodimer in opposite directions along z axis. The interfaces of each protein chain is parallel to

Re: [gmx-users] Pulling two groups in opposite direction

2018-05-18 Thread Naba
> > On 5/17/18 1:39 AM, Naba wrote: > >> On 5/16/18 3:32 AM, Naba wrote: > >>> Dear all, > >>> > >>> I am using gromacs 5.1.2 and trying to pull both monomers of 128 amino > >>> acids from its homodimer in opposite directions along z axis. The > >>> interfaces of each protein chain is parallel to

Re: [gmx-users] Pulling two groups in opposite direction

2018-05-17 Thread Justin Lemkul
On 5/17/18 1:39 AM, Naba wrote: On 5/16/18 3:32 AM, Naba wrote: Dear all, I am using gromacs 5.1.2 and trying to pull both monomers of 128 amino acids from its homodimer in opposite directions along z axis. The interfaces of each protein chain is parallel to the z axis. I do not need any

Re: [gmx-users] Pulling two groups in opposite direction

2018-05-17 Thread Naba
On Thu, May 17, 2018 at 11:09 AM, Naba wrote: > On 5/16/18 3:32 AM, Naba wrote: >> > Dear all, >> > >> > I am using gromacs 5.1.2 and trying to pull both monomers of 128 amino >> > acids from its homodimer in opposite directions along z axis. The >> > interfaces of

Re: [gmx-users] Pulling two groups in opposite direction

2018-05-16 Thread Naba
> > On 5/16/18 3:32 AM, Naba wrote: > > Dear all, > > > > I am using gromacs 5.1.2 and trying to pull both monomers of 128 amino > > acids from its homodimer in opposite directions along z axis. The > > interfaces of each protein chain is parallel to the z axis. I do not need > > any restraints in

Re: [gmx-users] Pulling two groups in opposite direction

2018-05-16 Thread Justin Lemkul
On 5/16/18 3:32 AM, Naba wrote: Dear all, I am using gromacs 5.1.2 and trying to pull both monomers of 128 amino acids from its homodimer in opposite directions along z axis. The interfaces of each protein chain is parallel to the z axis. I do not need any restraints in this case. I have gone