Re: [gmx-users] mdrun_mpi_d

2013-11-28 Thread Chandan Choudhury
Dear Eslami,

Gromacs 4.6.3 can automatically  take up all the cores. If you want to run
gromacs across the nodes. Then you need to compile using MPI.
Detailed instruction is available here
http://www.gromacs.org/Documentation/Installation_Instructions.

Chandan


--
Chandan kumar Choudhury
NCL, Pune
INDIA


On Fri, Nov 29, 2013 at 3:27 AM, Mahboobeh Eslami 
mahboobeh.esl...@yahoo.com wrote:

 Hi everybody
 i install gromacs 4.6.3  double precision and parallel
 what is the best correct command for  mdrun_mpi_d on single machine with
 multiple processors (core=8)


 thanks for your help
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Re: [gmx-users] mdrun_mpi_d

2013-11-28 Thread Mahboobeh Eslami
hi
i installed openmpi and i set -DGMX_MPI=ON in cmake command.



are these casesenough?
thanks




On Friday, November 29, 2013 7:59 AM, Chandan Choudhury iitd...@gmail.com 
wrote:
 
Dear Eslami,

Gromacs 4.6.3 can automatically  take up all the cores. If you want to run 
gromacs across the nodes. Then you need to compile using MPI.
Detailed instruction is available here 
http://www.gromacs.org/Documentation/Installation_Instructions.

Chandan



--
Chandan kumar Choudhury
NCL, Pune
INDIA


On Fri, Nov 29, 2013 at 3:27 AM, Mahboobeh Eslami mahboobeh.esl...@yahoo.com 
wrote:

Hi everybody
i install gromacs 4.6.3  double precision and parallel
what is the best correct command for  mdrun_mpi_d on single machine with 
multiple processors (core=8)


thanks for your help
--
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

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