Re: [gmx-users] missing residues in PDB file

2014-03-19 Thread Andres Ortega Guerrero
You could add them with modeller or rosseta, Andrés Ortega Ing. Electrónica Universidad del Valle El 19/03/2014, a las 14:36, "Guo, Yanan" escribió: > Hello dear gmx-users, > > I want to transform a .pdb file to a .gro file using pdb2gmx. But there are > some missing residues in my .pdb f

Re: [gmx-users] missing residues in pdb file

2013-12-14 Thread Justin Lemkul
On Sat, Dec 14, 2013 at 7:03 AM, delara aghaie wrote: > Dear Gromacs users, I am going to simulate human serum albumin( HSA) .. > The pdb file contains warfarin as well. > > Now I have two questions: > 1) to delete warfarin which lines should be removed? only those starting > with HETATM or more?