branch master updated (3078821 -> 54d556b)

2017-03-16 Thread Tobias Geerinckx-Rice
nckx pushed a change to branch master in repository guix. from 3078821 gnu: asciidoc: Use local docbook-xml package. new 54d556b gnu: youtube-dl: Update to 2017.03.16. The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate

01/01: gnu: youtube-dl: Update to 2017.03.16.

2017-03-16 Thread Tobias Geerinckx-Rice
nckx pushed a commit to branch master in repository guix. commit 54d556bdd739dc617c27eeedf9e28706e3277d0e Author: Tobias Geerinckx-Rice Date: Fri Mar 17 03:08:45 2017 +0100 gnu: youtube-dl: Update to 2017.03.16. * gnu/packages/video.scm (youtube-dl): Update to

01/01: gnu: asciidoc: Use local docbook-xml package.

2017-03-16 Thread Kei Kebreau
kkebreau pushed a commit to branch master in repository guix. commit 3078821d1380c26c738be6b5d430c595327d401f Author: Kei Kebreau Date: Thu Mar 16 01:37:42 2017 -0400 gnu: asciidoc: Use local docbook-xml package. * gnu/packages/documentation.scm

branch master updated (f9cdf1c -> 3078821)

2017-03-16 Thread Kei Kebreau
kkebreau pushed a change to branch master in repository guix. from f9cdf1c gnu: Add knot. new 3078821 gnu: asciidoc: Use local docbook-xml package. The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The

02/03: gnu: Add liburcu.

2017-03-16 Thread Tobias Geerinckx-Rice
nckx pushed a commit to branch master in repository guix. commit 754667f0eb44491370a2ec4fa0b4705cfcf6d237 Author: Tobias Geerinckx-Rice Date: Sun Oct 30 16:32:22 2016 +0100 gnu: Add liburcu. * gnu/packages/datastructures.scm (liburcu): New variable. ---

01/03: gnu: dns: Fix typo and use @dfn in descriptions.

2017-03-16 Thread Tobias Geerinckx-Rice
nckx pushed a commit to branch master in repository guix. commit 366efcb2fbc78c7fdeabf795f4d27ccfcf61c8a4 Author: Tobias Geerinckx-Rice Date: Thu Mar 16 16:08:42 2017 +0100 gnu: dns: Fix typo and use @dfn in descriptions. * gnu/packages/dns.scm

03/03: gnu: Add knot.

2017-03-16 Thread Tobias Geerinckx-Rice
nckx pushed a commit to branch master in repository guix. commit f9cdf1c15b83392fc85e7dcbfa019d184356591b Author: Tobias Geerinckx-Rice Date: Thu Mar 16 15:30:15 2017 +0100 gnu: Add knot. * gnu/packages/dns.scm (knot): New variable. --- gnu/packages/dns.scm | 81

branch master updated (2ec5ba8 -> f9cdf1c)

2017-03-16 Thread Tobias Geerinckx-Rice
nckx pushed a change to branch master in repository guix. from 2ec5ba8 gnu: linux-libre: Update to 4.10.3. new 366efcb gnu: dns: Fix typo and use @dfn in descriptions. new 754667f gnu: Add liburcu. new f9cdf1c gnu: Add knot. The 3 revisions listed above as

02/03: gnu: linux-libre@4.4: Update to 4.4.54.

2017-03-16 Thread Leo Famulari
lfam pushed a commit to branch master in repository guix. commit 2044306f05bb0b4bf00dbf7835c9801896635189 Author: Leo Famulari Date: Thu Mar 16 18:25:55 2017 -0400 gnu: linux-libre@4.4: Update to 4.4.54. * gnu/packages/linux.scm (linux-libre-4.4): Update to

01/03: gnu: linux-libre@4.9: Update to 4.9.15.

2017-03-16 Thread Leo Famulari
lfam pushed a commit to branch master in repository guix. commit bcc5b74173d399af6cdc5fb155bdd7020d1d278e Author: Leo Famulari Date: Thu Mar 16 18:24:51 2017 -0400 gnu: linux-libre@4.9: Update to 4.9.15. * gnu/packages/linux.scm (linux-libre-4.9): Update to

branch master updated (49ac6db -> 2ec5ba8)

2017-03-16 Thread Leo Famulari
lfam pushed a change to branch master in repository guix. from 49ac6db gnu: qemu: Fix CVE-2017-{2620,2630}. new bcc5b74 gnu: linux-libre@4.9: Update to 4.9.15. new 2044306 gnu: linux-libre@4.4: Update to 4.4.54. new 2ec5ba8 gnu: linux-libre: Update to

02/02: gnu: qemu: Fix CVE-2017-{2620,2630}.

2017-03-16 Thread Leo Famulari
lfam pushed a commit to branch master in repository guix. commit 49ac6dbb0ae8386fd7da5d751107ba7a6aab44ad Author: Leo Famulari Date: Thu Mar 16 14:58:13 2017 -0400 gnu: qemu: Fix CVE-2017-{2620,2630}. * gnu/packages/patches/qemu-CVE-2017-2620.patch,

01/02: gnu: virglrenderer: Fix CVE-2017-6386.

2017-03-16 Thread Leo Famulari
lfam pushed a commit to branch master in repository guix. commit 1e5b8beeff95e0adf767f1c13963c39b794573fe Author: Leo Famulari Date: Thu Mar 16 14:13:08 2017 -0400 gnu: virglrenderer: Fix CVE-2017-6386. * gnu/packages/patches/virglrenderer-CVE-2017-6386.patch:

branch master updated (ad172c4 -> 49ac6db)

2017-03-16 Thread Leo Famulari
lfam pushed a change to branch master in repository guix. from ad172c4 doc: Reorganize categories. new 1e5b8be gnu: virglrenderer: Fix CVE-2017-6386. new 49ac6db gnu: qemu: Fix CVE-2017-{2620,2630}. The 2 revisions listed above as "new" are entirely new to this

11/12: doc: Mention 'guix pack' reproducibility.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 107b8da6228fca888a0801c3eadf4bb23a6b46a4 Author: Ludovic Courtès Date: Thu Mar 16 22:59:33 2017 +0100 doc: Mention 'guix pack' reproducibility. * doc/guix.texi (Invoking guix pack): Mention

08/12: docker: Build images in a reproducible fashion.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 54241dc8e62c8616dcd72effe816e6e570607055 Author: Ludovic Courtès Date: Thu Mar 16 21:56:10 2017 +0100 docker: Build images in a reproducible fashion. * guix/docker.scm (%tar-determinism-options):

03/12: services: connman: Rework service.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 34d60c49cbffcee2bdaec32f0bfe2fef1c1ea8e6 Author: Mathieu Othacehe Date: Mon Feb 20 16:25:44 2017 +0100 services: connman: Rework service. * gnu/services/networking.scm (connman-service):

04/12: memoization: Micro-optimize code produced by 'define-cache-procedure'.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 146db52a188b871769d9512867aa7f409f37dbac Author: Ludovic Courtès Date: Thu Mar 16 13:41:51 2017 +0100 memoization: Micro-optimize code produced by 'define-cache-procedure'. * guix/memoization.scm

07/12: pack: Use a fixed timestamp in Docker images.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 84dda5a9c0772b2507fab3209938ead9da2a3442 Author: Ludovic Courtès Date: Thu Mar 16 21:41:38 2017 +0100 pack: Use a fixed timestamp in Docker images. * guix/docker.scm (build-docker-image): Add

01/12: utils: Move base16 procedures to (guix base16).

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 4c0c4db0702048488a9712dbba7cad862c667d54 Author: Ludovic Courtès Date: Wed Mar 15 21:54:34 2017 +0100 utils: Move base16 procedures to (guix base16). * guix/utils.scm (bytevector->base16-string,

06/12: pack: Add '--format' option and Docker output support.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit b1edfbc37f2f008188d91f594b046c5986485e47 Author: Ludovic Courtès Date: Thu Mar 16 18:02:59 2017 +0100 pack: Add '--format' option and Docker output support. * guix/docker.scm: Remove dependency on

12/12: doc: Reorganize categories.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit ad172c4a767e9a88d8861a1bd979c3a140dfdb68 Author: Ludovic Courtès Date: Thu Mar 16 23:03:40 2017 +0100 doc: Reorganize categories. * doc/guix.texi: Move "guix build" to the "Software Development"

09/12: pack: Honor symlinks in the Docker back-end.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 9e84ea3673f77ebe5c5e9ce39fbcdb6d7bc8a06f Author: Ludovic Courtès Date: Thu Mar 16 22:40:06 2017 +0100 pack: Honor symlinks in the Docker back-end. * guix/docker.scm (symlink-source,

branch master updated (2c715a9 -> ad172c4)

2017-03-16 Thread Ludovic Court�s
civodul pushed a change to branch master in repository guix. from 2c715a9 gnu: password-store: Fix compatibility with GnuPG 2.1.19. new 4c0c4db utils: Move base16 procedures to (guix base16). new d938a58 gexp: Add '=>' syntax to import computed modules. new

10/12: pack: Allow for "-S /opt/foo=".

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit db3f2b61adfe56d69029ec5f6d962462a50a1f33 Author: Ludovic Courtès Date: Thu Mar 16 22:46:43 2017 +0100 pack: Allow for "-S /opt/foo=". Reported by Andy Wingo. * guix/scripts/pack.scm

02/12: gexp: Add '=>' syntax to import computed modules.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit d938a58beefc669ab340aa1aeab49df3dc24d123 Author: Ludovic Courtès Date: Wed Mar 15 22:14:36 2017 +0100 gexp: Add '=>' syntax to import computed modules. * guix/gexp.scm (imported-files)[file-pair]:

05/12: pack: Honor command-line options related to the store.

2017-03-16 Thread Ludovic Court�s
civodul pushed a commit to branch master in repository guix. commit 2971f39c3330a69f44d1ac97443e42b0f8e0173e Author: Ludovic Courtès Date: Thu Mar 16 17:31:10 2017 +0100 pack: Honor command-line options related to the store. * guix/scripts/pack.scm (guix-pack): Call

01/01: gnu: mesa: Fix typo.

2017-03-16 Thread Leo Famulari
lfam pushed a commit to branch core-updates in repository guix. commit 38c4ca414165dfc5ed2bcc69a50280f710f11bcf Author: Leo Famulari Date: Thu Mar 16 17:19:47 2017 -0400 gnu: mesa: Fix typo. The typo caused the configure phase to fail like this:

branch core-updates updated (4cacd87 -> 38c4ca4)

2017-03-16 Thread Leo Famulari
lfam pushed a change to branch core-updates in repository guix. from 4cacd87 Merge remote-tracking branch 'origin/master' into core-updates new 38c4ca4 gnu: mesa: Fix typo. The 1 revisions listed above as "new" are entirely new to this repository and will be described in

branch master updated (2441c28 -> 2c715a9)

2017-03-16 Thread Cl�ment Lassieur
snape pushed a change to branch master in repository guix. from 2441c28 gnu: Add r-seurat. new 2c715a9 gnu: password-store: Fix compatibility with GnuPG 2.1.19. The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate emails.

01/01: gnu: password-store: Fix compatibility with GnuPG 2.1.19.

2017-03-16 Thread Cl�ment Lassieur
snape pushed a commit to branch master in repository guix. commit 2c715a922324e0cd1ab50c5ea0b70f12a33565d5 Author: Clément Lassieur Date: Wed Mar 15 23:49:32 2017 +0100 gnu: password-store: Fix compatibility with GnuPG 2.1.19. *

01/01: gnu: Add r-seurat.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit 2441c284140ddbd354b61c9d1606af1357f95c1f Author: Raoul Jean Pierre Bonnal Date: Thu Jan 19 19:55:30 2017 +0100 gnu: Add r-seurat. * gnu/packages/bioinformatics.scm (r-seurat): New

branch master updated (7984935 -> 2441c28)

2017-03-16 Thread Ricardo Wurmus
rekado pushed a change to branch master in repository guix. from 7984935 gnu: sra-tools: Update to 2.8.2-1. new 2441c28 gnu: Add r-seurat. The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed

01/06: gnu: ngs-sdk: Update to 1.3.0.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit 6c4ccf3228dd16e2d53168298b7bcf1a6874d3a8 Author: Ricardo Wurmus Date: Thu Mar 16 10:18:48 2017 +0100 gnu: ngs-sdk: Update to 1.3.0. * gnu/packages/bioinformatics.scm (ngs-sdk): Update to 1.3.0.

04/06: gnu: ncbi-vdb: Override search path for java-ngs.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit 558e23074e258202421e8e675927ec35f35db493 Author: Ricardo Wurmus Date: Thu Mar 16 13:38:39 2017 +0100 gnu: ncbi-vdb: Override search path for java-ngs. * gnu/packages/bioinformatics.scm

03/06: gnu: ncbi-vdb: Use modify-phases syntax.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit 70989e446ef2d2ac2d0d67a1ae78c5e1499a Author: Ricardo Wurmus Date: Thu Mar 16 10:20:56 2017 +0100 gnu: ncbi-vdb: Use modify-phases syntax. * gnu/packages/bioinformatics.scm

02/06: gnu: ncbi-vdb: Update to 2.8.2.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit 5021f5478795901bdabf49cf68c0dfd7df895dc4 Author: Ricardo Wurmus Date: Thu Mar 16 10:19:25 2017 +0100 gnu: ncbi-vdb: Update to 2.8.2. * gnu/packages/bioinformatics.scm (ncbi-vdb): Update to

06/06: gnu: sra-tools: Update to 2.8.2-1.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit 79849358f86ca9e49298f3c9f3cf2e964e69ecac Author: Ricardo Wurmus Date: Thu Mar 16 13:40:36 2017 +0100 gnu: sra-tools: Update to 2.8.2-1. * gnu/packages/bioinformatics.scm (sra-tools): Update to

05/06: gnu: ncbi-vdb: Install configuration files.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch master in repository guix. commit d5e17162397a260f00be5d437c2405c7dfb52076 Author: Ricardo Wurmus Date: Thu Mar 16 13:39:53 2017 +0100 gnu: ncbi-vdb: Install configuration files. * gnu/packages/bioinformatics.scm

branch master updated (0f03c53 -> 7984935)

2017-03-16 Thread Ricardo Wurmus
rekado pushed a change to branch master in repository guix. from 0f03c53 gnu: Add pzstd. new 6c4ccf3 gnu: ngs-sdk: Update to 1.3.0. new 5021f54 gnu: ncbi-vdb: Update to 2.8.2. new 709 gnu: ncbi-vdb: Use modify-phases syntax. new 558e230 gnu:

branch core-updates updated (56f76b0 -> 4cacd87)

2017-03-16 Thread Efraim Flashner
efraim pushed a change to branch core-updates in repository guix. from 56f76b0 gnu: jack-2: Fix build by patching fast_rand. adds 9e61d15 gnu: bitcoin-core: Update to 0.14.0. adds 13292ee gnu: Add libmesode. adds 781d3b0 gnu: Add libstrophe. adds a829c65

01/01: Merge remote-tracking branch 'origin/master' into core-updates

2017-03-16 Thread Efraim Flashner
efraim pushed a commit to branch core-updates in repository guix. commit 4cacd87e4d4b72945c19e993eef7af387fce957c Merge: 56f76b0 0f03c53 Author: Efraim Flashner Date: Thu Mar 16 13:11:28 2017 +0200 Merge remote-tracking branch 'origin/master' into core-updates

branch core-updates updated (5707ce6 -> 56f76b0)

2017-03-16 Thread Ricardo Wurmus
rekado pushed a change to branch core-updates in repository guix. from 5707ce6 Revert "gnu: bdftopcf: Use libxfont2." new 56f76b0 gnu: jack-2: Fix build by patching fast_rand. The 1 revisions listed above as "new" are entirely new to this repository and will be described in

01/01: gnu: jack-2: Fix build by patching fast_rand.

2017-03-16 Thread Ricardo Wurmus
rekado pushed a commit to branch core-updates in repository guix. commit 56f76b08be97549dcc409b090186103413dc4e4b Author: Ricardo Wurmus Date: Thu Mar 16 09:41:20 2017 +0100 gnu: jack-2: Fix build by patching fast_rand. * gnu/packages/audio.scm

01/01: Revert "gnu: bdftopcf: Use libxfont2."

2017-03-16 Thread Leo Famulari
lfam pushed a commit to branch core-updates in repository guix. commit 5707ce6e4bfd808c5fd78b043ab0e0c92ee0901e Author: Leo Famulari Date: Thu Mar 16 01:57:33 2017 -0400 Revert "gnu: bdftopcf: Use libxfont2." Building with libxfont2 leads to an error in the

branch core-updates updated (b8f99f4 -> 5707ce6)

2017-03-16 Thread Leo Famulari
lfam pushed a change to branch core-updates in repository guix. from b8f99f4 gnu: nss, nss-certs: Update to 3.29.3. new 5707ce6 Revert "gnu: bdftopcf: Use libxfont2." The 1 revisions listed above as "new" are entirely new to this repository and will be described in separate