Ludovic Courtès writes:
>> From a71d408351e54031a1bb0ecb143128a5512fc75e Mon Sep 17 00:00:00 2001
>> From: Ricardo Wurmus
>> Date: Sun, 15 Mar 2015 23:12:32 +0100
>> Subject: [PATCH] gnu: gtk+-2: build gobject introspection typelib file.
>>
>> * gnu/packages/gtk.scm (gtk+-2): add `gobject-intros
Tomáš Čech skribis:
> On Thu, Mar 19, 2015 at 05:17:10PM +0100, Ludovic Courtès wrote:
>>Tomáš Čech skribis:
[...]
>>> + ;; release is too old to be built correctly against ffmpeg, libjpeg
>>> and
>>> + ;; more, lets go with head containing all required fixes already
>>> + (
Tomáš Čech skribis:
> * gnu/packages/code.scm (the-silver-searcher): New variable.
[...]
> +(source (origin
> + (method url-fetch)
> + (uri (string-append
> +"https://github.com/ggreer/the_silver_searcher/archive/";
> +
Ricardo Wurmus skribis:
> Ludovic Courtès writes:
>
>>> From 9c9ef4fde4003a3bc9af73462552edde5d46c909 Mon Sep 17 00:00:00 2001
>>> From: Ricardo Wurmus
>>> Date: Tue, 10 Mar 2015 14:05:48 +0100
>>> Subject: [PATCH 3/5] gnu: icedtea6: patch patches in separate build phase.
>>>
>>> * gnu/packages/
Ricardo Wurmus skribis:
> From fecf2890397ef697fa3a0110555e99816e49 Mon Sep 17 00:00:00 2001
> From: Ricardo Wurmus
> Date: Tue, 10 Mar 2015 11:32:48 +0100
> Subject: [PATCH] gnu: Add SuiteSparse.
>
> * gnu/packages/maths.scm (suitesparse): New variable.
I don’t if Eric has anything to add,
David Thompson skribis:
> From 3d97dbcf1907a67ed25fd90c09eb88d1b136d31a Mon Sep 17 00:00:00 2001
> From: David Thompson
> Date: Wed, 18 Mar 2015 20:01:12 -0400
> Subject: [PATCH 2/2] environment: Add --inclusive option.
>
> * guix/scripts/environment.scm (show-help): Add help.
> (%default-opti
Hi Guix,
Attached is a patch to add vcftools. The license of vcftools is
declared as LGPLv3.0 here[1] and in the README.
~~ Ricardo
>From 2f1b826719dbda30bfa63afbb7fd6457981258b3 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus
Date: Fri, 20 Mar 2015 16:50:33 +0100
Subject: [PATCH] gnu: Add vcfto
>From 18a14112b6e22248638d2b34e1c1b935e1bcd343 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus
Date: Fri, 20 Mar 2015 16:17:55 +0100
Subject: [PATCH] gnu: Add cutadapt.
* gnu/packages/bioinformatics.scm (cutadapt): New variable.
---
gnu/packages/bioinformatics.scm | 40
Eric Bavier writes:
> On 2015-03-20 06:37, Ricardo Wurmus wrote:
>> * gnu/packages/perl.scm (perl-uri): New variable.
>
> This package has existed in the (gnu packages web) module for some time
> now. I just recently updated the version to 1.67 as well.
Ouch! Thanks for pointing me to this mo
Hi Guix,
attached is a patch to add a couple of transcriptome analysis scripts.
I had to use the git downloader because the releases are unusable: they
are really old and only contain the scripts but no longer the setup.py
script.
The git clone also isn't that nice; I had to delete some clutter a
On 2015-03-20 06:37, Ricardo Wurmus wrote:
* gnu/packages/perl.scm (perl-uri): New variable.
This package has existed in the (gnu packages web) module for some time
now. I just recently updated the version to 1.67 as well.
--
`~Eric
>From bd84fbfa95fc06c8580e033ac0986157efcd8c49 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus
Date: Fri, 20 Mar 2015 12:39:50 +0100
Subject: [PATCH] gnu: Add python2-pbcore.
* gnu/packages/bioinformatics.scm (python2-pbcore): New variable.
---
gnu/packages/bioinformatics.scm | 29
>From b50b37a9abcf049b310b613eed29a121b7b8b3b9 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus
Date: Fri, 20 Mar 2015 12:36:18 +0100
Subject: [PATCH] gnu: Add perl-uri.
* gnu/packages/perl.scm (perl-uri): New variable.
---
gnu/packages/perl.scm | 22 ++
1 file changed, 22 inser
Hi Guix,
attached is a patch to add Julia, a language for technical computing,
and one more library it depends on: double-conversion.
The release tarball comes with all dependencies bundled, but I tried
hard to make it build against system libraries. This didn't always
work, unfortunately.
libu
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