Re: Paper preprint: Reproducible genomics analysis pipelines with GNU Guix

2018-04-11 Thread Roel Janssen
Ricardo Wurmus writes: > Hey all, > > I’m happy to announce that the group I’m working with has released a > preprint of a paper on reproducibility with the title: > > Reproducible genomics analysis pipelines with GNU Guix >

Re: [rb-general] Paper preprint: Reproducible genomics analysis pipelines with GNU Guix

2018-04-11 Thread Holger Levsen
hi again, and extra kudos and thanks for releasing this under a free licence! \o/ -- cheers, Holger signature.asc Description: PGP signature

Re: [rb-general] Paper preprint: Reproducible genomics analysis pipelines with GNU Guix

2018-04-11 Thread Holger Levsen
On Wed, Apr 11, 2018 at 08:40:47PM +0200, Ricardo Wurmus wrote: > > just one thing/question: in the keywords you have "reproducible > Heh, it used to be “reproducible builds”, but the term was deemed too > abstract for the audience of biologists, so it was decided to change it > to “reproducible

Re: [rb-general] Paper preprint: Reproducible genomics analysis pipelines with GNU Guix

2018-04-11 Thread Holger Levsen
Hi Ricardo, On Wed, Apr 11, 2018 at 02:18:38PM +0200, Ricardo Wurmus wrote: > I’m happy to announce that the group I’m working with has released a > preprint of a paper on reproducibility with the title: > > Reproducible genomics analysis pipelines with GNU Guix >

Re: [rb-general] Paper preprint: Reproducible genomics analysis pipelines with GNU Guix

2018-04-11 Thread Ricardo Wurmus
Hi Holger, thanks for your comments! > just one thing/question: in the keywords you have "reproducible > software" but not "reproducible builds", which is kind of our "marketing > term". Do you think you could squeeze that in? Heh, it used to be “reproducible builds”, but the term was deemed

Paper preprint: Reproducible genomics analysis pipelines with GNU Guix

2018-04-11 Thread Ricardo Wurmus
Hey all, I’m happy to announce that the group I’m working with has released a preprint of a paper on reproducibility with the title: Reproducible genomics analysis pipelines with GNU Guix https://www.biorxiv.org/content/early/2018/04/11/298653 We built a collection of bioinformatics

Re: Guix-based build tool

2018-04-11 Thread Catonano
2018-04-09 17:30 GMT+02:00 Ludovic Courtès : > Hello! > > Pjotr Prins skribis: > > > Indeed, I love working with Guix and developing with Guix. Guix takes > > care of my deployment and configuration requirements. > > > > I have written some time in the

Re: [PATCH] guix-daemon: Add option to disable garbage collection.

2018-04-11 Thread Roel Janssen
Roel Janssen writes: > Ludovic Courtès writes: > >> Hello Roel, >> >> Roel Janssen skribis: >> >>> The patch adds a “disableGarbageCollection” boolean variable to the >>> guix-daemon settings, and on each occasion where a store item may be