Re: GNU Guix 1.2.0rc2 available for testing!

2020-11-19 Thread Ryan Prior
On November 19, 2020, Pierre Neidhardt wrote: > [--without-tests] would encourage untested builds if I > recall correctly That may have been a concern (I wasn't part of the conversation) but I don't see how the current implementation could do that. If a normal "guix build foo" fails, then it's a

New French PO file for 'guix-manual' (version 1.2.0-pre3)

2020-11-19 Thread Translation Project Robot
Hello, gentle maintainer. This is a message from the Translation Project robot. A revised PO file for textual domain 'guix-manual' has been submitted by the French team of translators. The file is available at: https://translationproject.org/latest/guix-manual/fr.po (We can arrange things

Re: Updating to latest Bioconductor release

2020-11-19 Thread Ricardo Wurmus
Hi, >> > http://logs.guix.gnu.org/guix/2020-11-19.log#182349 > >> Right, so I shouldn't have pushed to "wip-r" in the first place. > > Well, I think it is a lack of synchronisation between all of 3; > especially with this work around via external GitHub upstream. Yeah, sorry. I didn’t realize

Re: Updating to latest Bioconductor release

2020-11-19 Thread zimoun
Hi Roel, On Thu, 19 Nov 2020 at 20:03, Roel Janssen wrote: > > http://logs.guix.gnu.org/guix/2020-11-19.log#182349 > Right, so I shouldn't have pushed to "wip-r" in the first place. Well, I think it is a lack of synchronisation between all of 3; especially with this work around via external

Re: Updating to latest Bioconductor release

2020-11-19 Thread Roel Janssen
Hi Simon, On Thu, 2020-11-19 at 18:27 +0100, zimoun wrote: > Hi Roel, > > Quick heads up of Ricardo from IRC. > > On Thu, 19 Nov 2020 at 17:25, Roel Janssen wrote: > > > Well, they got removed from Savannah. Now I get this when I try to > > push: > >

Re: Updating to latest Bioconductor release

2020-11-19 Thread zimoun
Hi Roel, Quick heads up of Ricardo from IRC. On Thu, 19 Nov 2020 at 17:25, Roel Janssen wrote: > Well, they got removed from Savannah. Now I get this when I try to > push: http://logs.guix.gnu.org/guix/2020-11-19.log#182429 > $ git push -f origin wip-r > Enumerating objects: 1599, done. >

Re: guix depends on openldap?

2020-11-19 Thread zimoun
Hi, On Thu, 19 Nov 2020 at 17:46, Julien Lepiller wrote: > >I am still confused. Why cmake-minimal needs all the protocols that > >curl supports? What I was expecting is that cmake-minimal depends on > >curl-minimal and that both packages are minimal. :-) > > >Because all in all, we end with

Re: guix depends on openldap?

2020-11-19 Thread Julien Lepiller
Le 19 novembre 2020 10:33:10 GMT-05:00, zimoun a écrit : >Hi, > >On Thu, 19 Nov 2020 at 15:32, Efraim Flashner >wrote: > >> > > > --8<---cut >here---start->8--- >> > > > $ guix graph -t bag --path guix openldap >> > > > guix@1.1.0-29.4e3ed9b >> > > >

Re: Updating to latest Bioconductor release

2020-11-19 Thread zimoun
Hi, > > To be concrete, the last commit on my branch is 9 days ago. And the > > last commit on Savannah wip-r is 30th Otc. > > Yeah, because mine got removed. Yeah, sorry. I think Ricardo pushed. The history is: - I pushed on Tue Nov 10 16:31:17 to GitHub rewriting the history - Ricardo

Re: Updating to latest Bioconductor release

2020-11-19 Thread Roel Janssen
On Thu, 2020-11-19 at 17:18 +0100, zimoun wrote: > On Thu, 19 Nov 2020 at 16:57, Roel Janssen wrote: > > > My bad, I jumped to a conclusion too quickly. :) > > No worries. :-) > > > > So, *something* removed my commits to the wip-r branch. Is it some > > kind > > of automation that syncs the

Re: Updating to latest Bioconductor release

2020-11-19 Thread zimoun
On Thu, 19 Nov 2020 at 16:57, Roel Janssen wrote: > My bad, I jumped to a conclusion too quickly. :) No worries. :-) > So, *something* removed my commits to the wip-r branch. Is it some kind > of automation that syncs the Github and the Savannah branches? Which upstream? I have no access on

Re: guix depends on openldap?

2020-11-19 Thread Danny Milosavljevic
Hi Efraim, On Thu, 19 Nov 2020 15:56:34 +0200 Efraim Flashner wrote: > I think a better question is can cmake-minimal depend on a new > curl-minimal, or does it even need curl at all? In the course of debugging the "32 bit ARM on 64 bit host can't read directories" problem ("json-c") and

Re: Updating to latest Bioconductor release

2020-11-19 Thread Roel Janssen
On Thu, 2020-11-19 at 16:36 +0100, zimoun wrote: > Hi, > > On Thu, 19 Nov 2020 at 16:31, Roel Janssen wrote: > > > I fixed the build of r-rhfd5lib. > > Cool! > > > It seems, however, that you removed all of my changes to the wip-r > > branch. Why? > > Who is "you"? ;-) > Personally, I did

Re: Updating to latest Bioconductor release

2020-11-19 Thread zimoun
Hi, On Thu, 19 Nov 2020 at 16:31, Roel Janssen wrote: > I fixed the build of r-rhfd5lib. Cool! > It seems, however, that you removed all of my changes to the wip-r > branch. Why? Who is "you"? ;-) Personally, I did nothing; or I have nights that I am not aware. :-) (Even, I do not have

Re: guix depends on openldap?

2020-11-19 Thread zimoun
Hi, On Thu, 19 Nov 2020 at 15:32, Efraim Flashner wrote: > > > > --8<---cut here---start->8--- > > > > $ guix graph -t bag --path guix openldap > > > > guix@1.1.0-29.4e3ed9b > > > > guile-ssh@0.13.1 > > > > libssh@0.9.5 > > > > cmake-minimal@3.16.5 > > > >

Re: Updating to latest Bioconductor release

2020-11-19 Thread Roel Janssen
On Wed, 2020-11-18 at 17:59 +0100, zimoun wrote: > On Wed, 18 Nov 2020 at 17:33, Roel Janssen wrote: > > > Okay.  Then I'll look into it.  I currently have only these left as > > changed in my tree: > > - r-atacseqqc: Needs r-rhdf5lib. > > - r-cytoml: Needs r-rhdf5lib. > > - r-scater: Needs

Re: guix depends on openldap?

2020-11-19 Thread Efraim Flashner
On Thu, Nov 19, 2020 at 04:18:32PM +0200, Efraim Flashner wrote: > On Thu, Nov 19, 2020 at 03:56:34PM +0200, Efraim Flashner wrote: > > On Thu, Nov 19, 2020 at 02:41:51PM +0100, zimoun wrote: > > > Dear, > > > > > > This morning I garbage-collected some old items and pulled. Well, I > > > was

Re: guix depends on openldap?

2020-11-19 Thread Efraim Flashner
On Thu, Nov 19, 2020 at 03:56:34PM +0200, Efraim Flashner wrote: > On Thu, Nov 19, 2020 at 02:41:51PM +0100, zimoun wrote: > > Dear, > > > > This morning I garbage-collected some old items and pulled. Well, I > > was then surprised that "guix environment guix" fetches 'openldap'. > > Is it

Re: guix depends on openldap?

2020-11-19 Thread Efraim Flashner
On Thu, Nov 19, 2020 at 02:41:51PM +0100, zimoun wrote: > Dear, > > This morning I garbage-collected some old items and pulled. Well, I > was then surprised that "guix environment guix" fetches 'openldap'. > Is it expected? > > --8<---cut here---start->8---

Re: A plan for parameterized packages

2020-11-19 Thread Denis 'GNUtoo' Carikli
On Sun, 15 Nov 2020 22:24:29 +0100 raingloom wrote: > Alpine already achieves an incredibly tiny install size by splitting > packages into many outputs. We could and should do the same. > As far as I know, they do not have parameterized packages. That also depends on how far you want to go. Last

guix depends on openldap?

2020-11-19 Thread zimoun
Dear, This morning I garbage-collected some old items and pulled. Well, I was then surprised that "guix environment guix" fetches 'openldap'. Is it expected? --8<---cut here---start->8--- $ guix graph -t bag --path guix openldap guix@1.1.0-29.4e3ed9b

Re: Release: Docker Image? DockerHub? skopeo?

2020-11-19 Thread Danny Milosavljevic
Hi zimoun, On Thu, 19 Nov 2020 10:21:16 +0100 zimoun wrote: > Let’s postpone this Docker image work and start a new fresh thread once > v1.2.0 is published and the goal to have something for v1.3.0, well > that’s my point of view. After Ryan Prior's E-Mail I'm pretty sure my workaround of

Re: Release: Docker Image? DockerHub? skopeo?

2020-11-19 Thread zimoun
Hi Danny, Thank you for the explanations. Make sense. :-) On Tue, 17 Nov 2020 at 20:23, Danny Milosavljevic wrote: > No, I don't use docker that much--and when I do, it's to run simple images > others have created. So I just really don't know how this is supposed to > be set up. I mean

Re: GNU Guix 1.2.0rc2 available for testing!

2020-11-19 Thread Pierre Neidhardt
Hi! zimoun writes: > +`--with-c-toolchain`, and `--without-tests`. Consider this example: Oh, I didn't notice we had a --without-tests now, good to know! I remember asking about such an option a while back, but this was refused on the ground that it would encourage untested builds if I