Re: [PATCH 07/16] gnu: Add python-nbformat.

Roel Janssen writes: > Ricardo Wurmus writes: > >> * gnu/packages/python.scm (python-nbformat, python2-nbformat): New >> variables. >> --- >> gnu/packages/python.scm | 28 >> 1 file changed, 28 insertions(+) >> >> dif

Re: [PATCH 08/16] gnu: Add python-bleach.

Roel Janssen writes: > Ricardo Wurmus writes: > >> * gnu/packages/python.scm (python-bleach, python2-bleach): New >> variables. >> --- >> gnu/packages/python.scm | 26 ++ >> 1 file changed, 26 insertions(+) >> >> dif

Re: swh-plugins-lv2: New variable [WIP, v2]

Hi Flo, > On 12/06/2015 11:44 PM, Florian Paul Schmidt wrote: >> Just pushing this out to get some feedback (I'll need to package more >> audio plugins and this might be a good start to talk about possible issues) > > Updated the patch, since it seems the other version didn't get submitted.. I’m

Re: [PATCH 2/4] gnu: Add r-bigmemory-sri.

Roel Janssen writes: >> Your patch is fine if you add a comment above the license field that >> states that these one of these two licenses may be choosen. > > Right. Would the following patch be alright then: > > modified gnu/packages/statistics.scm > @@ -2787,6 +2787,26 @@ Fourier transform

Re: [PATCH 14/16] gnu: Add python-jupyter-console.

Roel Janssen writes: > Ricardo Wurmus writes: > >> * gnu/packages/python.scm (python-jupyter-console, >> python2-jupyter-console): New variable. >> --- >> gnu/packages/python.scm | 29 + >> 1 file changed, 29 insertions(+) >&g

Re: [PATCH 09/16] gnu: Add python-entrypoints.

Hartmut Goebel writes: > Am 01.11.2016 um 13:20 schrieb Ricardo Wurmus: >> + (modify-phases %standard-phases >> + (delete 'build) >> + (replace 'install >> + (lambda* (#:key inputs outputs #:allow-other-keys) >> +

Re: [PATCH 15/16] gnu: python-ipython: Update to 4.0.0.

Roel Janssen writes: > Ricardo Wurmus writes: > >> * gnu/packages/python.scm (python-ipython): Update to 4.0.0. >> [inputs]: Keep only "readline" and "which"; move the remaining inputs >> to propagated-inputs, except for "python-requests&

Re: [PATCH 16/16] gnu: Add jupyter.

Roel Janssen writes: > And that concludes this patch series. Thanks a lot for adding Jupyter. > Like I said, I attempted to do it, but I got stuck / ran out of time to > implement it before I needed it. It's great to see that it will be > added to GNU Guix soon. Thank you very much for the th

Re: [Patch 1/10] Add pjproject.

Hi Lukas, > Sorry for the delay! Likewise! :) > Ricardo Wurmus writes: >>> My idea here is the following: The source tree downloaded here contains >>> the complete source for libring, which includes the patches to >>> pjproject. In this snippet I try to

Re: [Patch 8/10] Add libring.

Lukas Gradl writes: > From ad9397f36c7d4e8797c38a838f27079b8ba32631 Mon Sep 17 00:00:00 2001 > From: Lukas Gradl > Date: Sun, 28 Aug 2016 12:26:23 -0500 > Subject: [PATCH 08/10] gnu: Add libring. > * gnu/packages/telephony.scm (libring): New variable. > --- > gnu/packages/telephony.scm | 94

Re: [Patch 1/10] Add pjproject.

Mathieu Lirzin writes: > Hi, > > Ricardo Wurmus writes: > >> PS: for future reference, this >> >> (lambda (file) >> (if (or (string=? file ".") >> (string=? file "..")) >> #f >>

Re: Phase `validate-runpath' fails: lib not in RUNPATH

Hartmut Goebel writes: > I'm trying to build thunderbird ATM, modelled after the build for icecat. > > Phase `validate-runpath' fails with errors like this: > > > /gnu/store/…-thunderbird-45.4.0/lib/firefox-45.4.1/browser/components/libbrowsercomps.so: > error: depends on 'libplds4.so',

[PATCH 2/2] gnu: Add faust-2.

* gnu/packages/audio.scm (faust-2): New variable. --- gnu/packages/audio.scm | 35 +++ 1 file changed, 35 insertions(+) diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm index b9034c9..1159e8d 100644 --- a/gnu/packages/audio.scm +++ b/gnu/packages/audio.

[PATCH 1/2] gnu: Add LLVM variant with RTTI support.

* gnu/packages/llvm.scm (llvm-with-rtti): New variable. --- gnu/packages/llvm.scm | 11 +++ 1 file changed, 11 insertions(+) diff --git a/gnu/packages/llvm.scm b/gnu/packages/llvm.scm index 1a1f7ee..96679bf 100644 --- a/gnu/packages/llvm.scm +++ b/gnu/packages/llvm.scm @@ -85,6 +85,17 @@

Re: [PATCH v3 3/3] gnu: Add kicad.

Leo Famulari writes: > On Wed, Nov 02, 2016 at 05:42:01PM +0200, Theodoros Foradis wrote: >> Right. Is it normal that the url is not checked again, after having the >> source in store? > > Yes, Guix finds the file named by the source hash in /gnu/store and so > it doesn't try downloading it. Yo

Re: [PATCH 1/2] gnu: Add LLVM variant with RTTI support.

Leo Famulari writes: > On Sun, Nov 06, 2016 at 08:34:23PM +0100, Ricardo Wurmus wrote: >> * gnu/packages/llvm.scm (llvm-with-rtti): New variable. > > Seems okay, although would it make sense to enable this in the main LLVM > package? I’m not sure, because it seems to require

Re: [PATCH 1/2] gnu: Add LLVM variant with RTTI support.

Leo Famulari writes: > On Tue, Nov 08, 2016 at 09:10:46AM +0100, Ricardo Wurmus wrote: >> >> Leo Famulari writes: >> >> > On Sun, Nov 06, 2016 at 08:34:23PM +0100, Ricardo Wurmus wrote: >> >> * gnu/packages/llvm.scm (llvm-with-rtti): New variable. &g

[PATCH] gnu: Add pcb-rnd.

* gnu/packages/engineering.scm (pcb-rnd): New variable. --- gnu/packages/engineering.scm | 27 +++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index b4d9af0..822d64c 100644 --- a/gnu/packages/engineering.scm +++

[PATCH] Fix ardour and mod-host builds.

This patch requires quite a few rebuilds. It is needed to fix the build of at least Ardour and mod-host. Should this go to core-updates? Ricardo Wurmus (1): gnu: fftw: Build threads library. gnu/packages/algebra.scm | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) -- 2.10.1

[PATCH] gnu: fftw: Build threads library.

* gnu/packages/algebra.scm (fftw)[arguments]: Add "--enable-threads" to configure flags. --- gnu/packages/algebra.scm | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm index 8e9695d..e212775 100644 --- a/gnu/packages/algebra.s

Re: [PATCH] gnu: fftw: Build threads library.

Ludovic Courtès writes: > Ricardo Wurmus skribis: > >> * gnu/packages/algebra.scm (fftw)[arguments]: Add "--enable-threads" to >> configure flags. >> --- >> gnu/packages/algebra.scm | 3 ++- >> 1 file changed, 2 insertions(+), 1 deletion(-) >

[PATCH] gnu: Add emacs-emms-mode-line-cycle.

* gnu/packages/emacs.scm (emacs-emms-mode-line-cycle): New variable. --- gnu/packages/emacs.scm | 23 +++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm index a065959..13b3bf5 100644 --- a/gnu/packages/emacs.scm +++ b/gnu/packages

Re: [PATCH 0/2] Fix IBus input methods.

Chris Marusich writes: > This is so good. Thank you for doing it! I am happy to confirm that > Japanese input via ibus-anthy works like a charm after your changes. > All I had to do was the following: I’m glad this works for you! > (1) install ibus, ibus-anthy, and anthy (anthy is probably n

[PATCH 1/2] gnu: Add drumkv1.

* gnu/packages/music.scm (drumkv1): New variable. --- gnu/packages/music.scm | 34 ++ 1 file changed, 34 insertions(+) diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm index 12233bf..5e882b2 100644 --- a/gnu/packages/music.scm +++ b/gnu/packages/music.s

[PATCH 2/2] gnu: Add samplv1.

* gnu/packages/music.scm (samplv1): New variable. --- gnu/packages/music.scm | 34 ++ 1 file changed, 34 insertions(+) diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm index 5e882b2..c81d9a0 100644 --- a/gnu/packages/music.scm +++ b/gnu/packages/music.s

Re: [PATCH 1/2] gnu: Add drumkv1.

宋文武 writes: > Ricardo Wurmus writes: > >> * gnu/packages/music.scm (drumkv1): New variable. >> --- >> gnu/packages/music.scm | 34 ++ >> 1 file changed, 34 insertions(+) >> >> diff --git a/gnu/packages/music.scm

Re: [PATCH] gnu: Add emacs-emms-mode-line-cycle.

Ludovic Courtès writes: > Ricardo Wurmus skribis: > >> * gnu/packages/emacs.scm (emacs-emms-mode-line-cycle): New variable. > > LGTM! > > (Looks pretty cool!) Thanks. Pushed as 2316078a4e64da0d6eee309e54f4b61c5b6cf30c. -- Ricardo

[PATCH 00/29] Add Biber

ht thing. ~~ Ricardo PS: is anyone interested in an effort to update all of our Perl packages? Ricardo Wurmus (29): gnu: Add perl-mojolicious. gnu: Add perl-autovivification. gnu: Add perl-business-isbn-data. gnu: Add perl-business-isbn. gnu: Add perl-business-issn. gnu: Add perl-ti

[PATCH 01/29] gnu: Add perl-mojolicious.

file mode 100644 index 000..9c92a95 --- /dev/null +++ b/gnu/packages/perl-web.scm @@ -0,0 +1,47 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2016 Ricardo Wurmus +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and

[PATCH 03/29] gnu: Add perl-business-isbn-data.

* gnu/packages/perl.scm (perl-business-isbn-data): New variable. --- gnu/packages/perl.scm | 20 1 file changed, 20 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 92d973b..733b865 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @

[PATCH 10/29] gnu: Add perl-date-simple.

* gnu/packages/perl.scm (perl-date-simple): New variable. --- gnu/packages/perl.scm | 22 ++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index b87e339..d3df8b2 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -16

[PATCH 06/29] gnu: Add perl-tie-cycle.

* gnu/packages/perl.scm (perl-tie-cycle): New variable. --- gnu/packages/perl.scm | 19 +++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 8e4ec88..aa275ea 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -6656,6

[PATCH 04/29] gnu: Add perl-business-isbn.

* gnu/packages/perl.scm (perl-business-isbn): New variable. --- gnu/packages/perl.scm | 25 - 1 file changed, 24 insertions(+), 1 deletion(-) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 733b865..157c715 100644 --- a/gnu/packages/perl.scm +++ b/gnu/pack

[PATCH 05/29] gnu: Add perl-business-issn.

* gnu/packages/perl.scm (perl-business-issn): New variable. --- gnu/packages/perl.scm | 19 +++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 157c715..8e4ec88 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -450

[PATCH 09/29] gnu: Add perl-data-uniqid.

* gnu/packages/perl.scm (perl-data-uniqid): New variable. --- gnu/packages/perl.scm | 20 1 file changed, 20 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 8bac955..b87e339 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -1331

[PATCH 02/29] gnu: Add perl-autovivification.

* gnu/packages/perl.scm (perl-autovivification): New variable. --- gnu/packages/perl.scm | 27 +++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index e9f3dca..92d973b 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.

[PATCH 07/29] gnu: Add perl-business-ismn.

* gnu/packages/perl.scm (perl-business-ismn): New variable. --- gnu/packages/perl.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index aa275ea..e23e828 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -4

[PATCH 16/29] gnu: Add perl-extutils-libbuilder.

* gnu/packages/perl.scm (perl-extutils-libbuilder): New variable. --- gnu/packages/perl.scm | 23 +++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 2dd6c01..226d1af 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.s

[PATCH 22/29] gnu: Add perl-text-roman.

* gnu/packages/perl.scm (perl-text-roman): New variable. --- gnu/packages/perl.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 42514d1..9ed0f05 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -6861

[PATCH 15/29] gnu: Add perl-encode-hanextra.

* gnu/packages/perl.scm (perl-encode-hanextra): New variable. --- gnu/packages/perl.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index de74c6d..2dd6c01 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@

[PATCH 08/29] gnu: Add perl-data-compare.

* gnu/packages/perl.scm (perl-data-compare): New variable. --- gnu/packages/perl.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index e23e828..8bac955 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -13

[PATCH 11/29] gnu: Add perl-datetime-calendar-julian.

* gnu/packages/perl.scm (perl-datetime-calendar-julian): New variable. --- gnu/packages/perl.scm | 24 1 file changed, 24 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index d3df8b2..5a42cbb 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/

[PATCH 13/29] gnu: Add perl-encode-eucjpascii.

* gnu/packages/perl.scm (perl-encode-eucjpascii): New variable. --- gnu/packages/perl.scm | 19 +++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index a742447..283aa8d 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@

[PATCH 14/29] gnu: Add perl-encode-jis2k.

* gnu/packages/perl.scm (perl-encode-jis2k): New variable. --- gnu/packages/perl.scm | 19 +++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 283aa8d..de74c6d 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -2362

[PATCH 12/29] gnu: perl-encode-detect: Move to alphabetical position.

* gnu/packages/perl.scm (perl-encode-detect): Move variable definition. --- gnu/packages/perl.scm | 45 + 1 file changed, 21 insertions(+), 24 deletions(-) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 5a42cbb..a742447 100644 --- a/gn

[PATCH 19/29] gnu: Add perl-mozilla-ca.

* gnu/packages/perl.scm (perl-mozilla-ca): New variable. --- gnu/packages/perl.scm | 20 1 file changed, 20 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index a3c9acc..03d3c43 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -4712,

[PATCH 27/29] gnu: Add perl-text-bibtex.

/packages/tex.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2016 Efraim Flashner ;;; Copyright © 2016 Federico Beffa ;;; Copyright © 2016 Thomas Danckaert +;;; Copyright © 2016 Ricardo Wurmus ;;; ;;; This file is part of GNU Guix. ;;; @@ -27,6 +28,7 @@ #:use-module (guix packages) #:use-module (guix

[PATCH 17/29] gnu: Add perl-ipc-cmd.

* gnu/packages/perl.scm (perl-ipc-cmd): New variable. --- gnu/packages/perl.scm | 20 1 file changed, 20 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 226d1af..a3f7c33 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -3323,6 +

[PATCH 18/29] gnu: Add perl-lingua-translit.

* gnu/packages/perl.scm (perl-lingua-translit): New variable. --- gnu/packages/perl.scm | 20 1 file changed, 20 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index a3f7c33..a3c9acc 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -

[PATCH 29/29] gnu: Add biber-2.5.

* gnu/packages/tex.scm (biber-2.5): New variable. --- gnu/packages/tex.scm | 26 ++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/tex.scm b/gnu/packages/tex.scm index e950944..7c84ed7 100644 --- a/gnu/packages/tex.scm +++ b/gnu/packages/tex.scm @@ -508,6 +508,

[PATCH 26/29] gnu: Add perl-xml-libxslt.

* gnu/packages/xml.scm (perl-xml-libxslt): New variable. --- gnu/packages/xml.scm | 23 +++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm index 505d585..80534d6 100644 --- a/gnu/packages/xml.scm +++ b/gnu/packages/xml.scm @@ -329,6 +

[PATCH 20/29] gnu: Add perl-sort-key.

* gnu/packages/perl.scm (perl-sort-key): New variable. --- gnu/packages/perl.scm | 19 +++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 03d3c43..427705b 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -5405,6 +

[PATCH 25/29] gnu: perl-unicode-linebreak: Update to 2016.003.

* gnu/packages/perl.scm (perl-unicode-linebreak): Update to 2016.003. --- gnu/packages/perl.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 36db63d..d54b2bc 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.sc

[PATCH 28/29] gnu: Add biber.

* gnu/packages/tex.scm (biber): New variable. --- gnu/packages/tex.scm | 82 1 file changed, 82 insertions(+) diff --git a/gnu/packages/tex.scm b/gnu/packages/tex.scm index 85ef83f..e950944 100644 --- a/gnu/packages/tex.scm +++ b/gnu/packages/t

[PATCH 21/29] gnu: Add perl-text-csv-xs.

* gnu/packages/perl.scm (perl-text-csv-xs): New variable. --- gnu/packages/perl.scm | 23 +++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 427705b..42514d1 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -6

[PATCH 24/29] gnu: Add perl-unicode-collate.

* gnu/packages/perl.scm (perl-unicode-collate): New variable. --- gnu/packages/perl.scm | 23 +++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 4260177..36db63d 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @

[PATCH 23/29] gnu: Add perl-unicode-normalize.

* gnu/packages/perl.scm (perl-unicode-normalize): New variable. --- gnu/packages/perl.scm | 18 ++ 1 file changed, 18 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 9ed0f05..4260177 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -

[PATCH 04/18] gnu: Add r-spams.

* gnu/packages/statistics.scm (r-spams): New variable. --- gnu/packages/statistics.scm | 52 + 1 file changed, 52 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 0ba3316..dcf6dbe 100644 --- a/gnu/packages/stati

[PATCH 00/18] Add R packages

;guix lint". These are all the R packages I currently have in my staging file. A few more bioinfo things might follow later. ~~ Ricardo Ricardo Wurmus (18): gnu: Add r-rematch. gnu: Add r-cellranger. gnu: Add r-googlesheets. gnu: Add r-spams. gnu: Add r-r4rna. gnu: Add r-dynami

[PATCH 03/18] gnu: Add r-googlesheets.

* gnu/packages/statistics.scm (r-googlesheets): New variable. --- gnu/packages/statistics.scm | 28 1 file changed, 28 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index cec304d..0ba3316 100644 --- a/gnu/packages/statistics.scm

[PATCH 01/18] gnu: Add r-rematch.

* gnu/packages/statistics.scm (r-rematch): New variable. --- gnu/packages/statistics.scm | 20 1 file changed, 20 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 700a895..612ea53 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/pac

[PATCH 07/18] gnu: Add r-preprocesscore.

* gnu/packages/statistics.scm (r-preprocesscore): New variable. --- gnu/packages/statistics.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index c486208..d2ca35e 100644 --- a/gnu/packages/statistics.scm +++ b

[PATCH 09/18] gnu: Add r-wgcna.

* gnu/packages/bioinformatics.scm (r-wgcna): New variable. --- gnu/packages/bioinformatics.scm | 36 1 file changed, 36 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 254ee13..7bcac59 100644 --- a/gnu/package

[PATCH 02/18] gnu: Add r-cellranger.

* gnu/packages/statistics.scm (r-cellranger): New variable. --- gnu/packages/statistics.scm | 22 ++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 612ea53..cec304d 100644 --- a/gnu/packages/statistics.scm +++ b/gn

[PATCH 08/18] gnu: Add r-fastcluster.

* gnu/packages/statistics.scm (r-fastcluster): New variable. --- gnu/packages/statistics.scm | 25 + 1 file changed, 25 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index d2ca35e..3c2bd0c 100644 --- a/gnu/packages/statistics.scm +++

[PATCH 10/18] gnu: Add r-sfsmisc.

* gnu/packages/statistics.scm (r-sfsmisc): New variable. --- gnu/packages/statistics.scm | 19 +++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 3c2bd0c..0c54258 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/pack

[PATCH 05/18] gnu: Add r-r4rna.

* gnu/packages/bioinformatics.scm (r-r4rna): New variable. --- gnu/packages/bioinformatics.scm | 23 +++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 773b590..254ee13 100644 --- a/gnu/packages/bioinformat

[PATCH 18/18] gnu: Add r-gkmsvm.

* gnu/packages/bioinformatics.scm (r-gkmsvm): New variable. --- gnu/packages/bioinformatics.scm | 33 + 1 file changed, 33 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 89a9db1..844bb8e 100644 --- a/gnu/packages/

[PATCH 11/18] gnu: Add r-kernlab.

* gnu/packages/machine-learning.scm (r-kernlab): New variable. --- gnu/packages/machine-learning.scm | 22 ++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index c239c4f..8f1f8ee 100644 --- a/gnu/packages/m

[PATCH 13/18] gnu: Add r-chipkernels.

* gnu/packages/bioinformatics.scm (r-chipkernels): New variable. --- gnu/packages/bioinformatics.scm | 36 1 file changed, 36 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7bcac59..98dad40 100644 --- a/gnu/p

[PATCH 06/18] gnu: Add r-dynamictreecut.

* gnu/packages/statistics.scm (r-dynamictreecut): New variable. --- gnu/packages/statistics.scm | 21 + 1 file changed, 21 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index dcf6dbe..c486208 100644 --- a/gnu/packages/statistics.scm +++ b

[PATCH 14/18] gnu: Add r-seqgl.

* gnu/packages/bioinformatics.scm (r-seqgl): New variable. --- gnu/packages/bioinformatics.scm | 30 ++ 1 file changed, 30 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 98dad40..89a9db1 100644 --- a/gnu/packages/bioi

[PATCH 15/18] gnu: Add r-gdata.

* gnu/packages/statistics.scm (r-gdata): New variable. --- gnu/packages/statistics.scm | 40 1 file changed, 40 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 8027aed..dc519b4 100644 --- a/gnu/packages/statistics

[PATCH 16/18] gnu: Add r-gplots.

* gnu/packages/statistics.scm (r-gplots): New variable. --- gnu/packages/statistics.scm | 40 1 file changed, 40 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index dc519b4..f014f16 100644 --- a/gnu/packages/statistic

[PATCH 12/18] gnu: Add r-gtools.

* gnu/packages/statistics.scm (r-gtools): New variable. --- gnu/packages/statistics.scm | 22 ++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 0c54258..8027aed 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/pa

[PATCH 17/18] gnu: Add r-rocr.

* gnu/packages/statistics.scm (r-rocr): New variable. --- gnu/packages/statistics.scm | 30 ++ 1 file changed, 30 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index f014f16..c2d46f2 100644 --- a/gnu/packages/statistics.scm +++ b/

[PATCH] Fix GCJ on armhf.

Hi Guix, with (a poorly formatted variant of) the attached patch I've built GCJ successfully in an ARM virtual machine. Building GCJ took about four days. I tested GCJ by building "ant", which seemed to have worked fine. ~~ Ricardo Ricardo Wurmus (1): gnu: gcj: Fix build

[PATCH] gnu: gcj: Fix build on armhf.

* gnu/packages/patches/gcj-arm-mode.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. * gnu/packages/gcc.scm (gcj): Add patch. [arguments]: Delete failing tests. --- gnu/local.mk| 1 + gnu/packages/gcc.scm| 14 + gnu/packages

[PATCH] Fix Ardour and mod-host.

o you think? ~~ Ricardo PS: I only built mod-host so far because I don't have enough space at the moment for building Ardour. Ricardo Wurmus (1): gnu: Add threaded variants of fftw and fftwf for Ardour and mod-host. gnu/packages/algebra.scm | 16 gnu/packages/audio.

Re: Mummi wishlist: API using Message-ID

zimoun writes: > For example . The number #16 is > really difficult to guess. :-) > > Instead, it is easy to get the Message-ID. (Using emacs-notmuch, only > hit the key ’ci’) Therefore, it could be nice to be able to provide > e.g., the URL: > > > > redi

Teams

first step I’d suggest collecting teams, setting up the email aliases, and updating the website to show the existing teams. Here’s a draft of three teams: * R team Simon Tournier Ricardo Wurmus * Java team Julien Lepiller * Rust team Efraim Flashner Aleksandr Vityazev Arun Isaac John Soo Maxim

Re: Mummi wishlist: API using Message-ID

Ricardo Wurmus writes: > zimoun writes: > >> For example <http://issues.guix.gnu.org/33899#16>. The number #16 is >> really difficult to guess. :-) >> >> Instead, it is easy to get the Message-ID. (Using emacs-notmuch, only >> hit the key ’ci’)

Re: Mummi wishlist: API using Message-ID

Arun Isaac writes: >> Once delpoyed to issues.guix.gnu.org you can visit >> >> https://issues.guix.gnu.org/msgid/HAv_FWZRa_dCADY6U07oX-E2vTrtcxk8ltkpfvTpYCsIh4O5PuItHGIh6w-g5GGmoqVEfkjDUOplpUErdGEPAiFYdrjjDhwd9RJ4OyjjGgY=@hector.link > > This is great news! Using this, we should be able to impl

Re: On commit access, patch review, and remaining healthy

> Date: Fri, 10 Jun 2022 14:27:44 +0200 > From: Giovanni Biscuolo > To: Arun Isaac , Guix Devel > > Cc: GNU Guix maintainers > Subject: Re: On commit access, patch review, and remaining healthy > Message-ID: <87o7z0itz3@xelera.eu> > Content-Type: text/plain; charset="utf-8" > >> - We

Re: On commit access, patch review, and remaining healthy

>> - We have strict conventions for commit messages. Our commit message >> Changelog is a strange dated practice from the time before good >> version control systems. I can live with it, but not everyone likes >> it. Let's just say I've heard complaints about it offlist. > > AFAIU this is a

Re: how to write services (was: Re: Teams)

caton...@gmail.com writes: > Il giorno mer, 15/06/2022 alle 01.52 +0700, Blake Shaw ha scritto: >> >> I found the documentation to be a bit confusing (understandably, as >> its new), but once the workflow snapped together its been amazing to >> see how easy it is to create new services.  > > Th

Re: how to write services (was: Re: Teams)

caton...@gmail.com writes: > Ricardo, the general map of the concepts involved in conceiving a > service is useful > > But in my toot I asked for something different > > I asked for indications about the process (what magic to use in the > REPL) There is no REPL magic. I write the service in c

Re: Teams: first draft list

Hi simon, > Here below a collection of answers. The teams are more or less. Maybe, > we could join some for having another structure. WDYT? Thank you for the initiative! I had been meaning to go through the whole thread and collect and organize all submissions, but you’ve done all the work

Re: proposal: guix-ment...@gnu.org list/alias

zimoun writes: > What is the status of this initiative? Only two people have come forward as possible mentors (Ludo and I). With only two potential mentors there’s no point in doing this as it’s not sustainable. > Therefore, how do we process next? We wait for volunteers. And if it turns ou

r-mathjaxr

Hi, unfortunately I had to revert commits 9078c651e8d50e08b46e3b2da1c532c15af5ddb6 (Add r-mathjaxr) and 00056eafaefed0af8535f219760fbbe01dd6f240 (updating r-metafor). mathjaxr contains vast amounts of minified JavaScript that cannot be built from source. The Guix R team has been working on packa

Re: r-mathjaxr

Ricardo Wurmus writes: > unfortunately I had to revert commits > 9078c651e8d50e08b46e3b2da1c532c15af5ddb6 (Add r-mathjaxr) and > 00056eafaefed0af8535f219760fbbe01dd6f240 (updating r-metafor). […] > The good news is that we can soon build a > slightly degraded version of math

Re: Teams: first draft list

Ludovic Courtès writes: > Ricardo Wurmus skribis: > >> Now the question is merely how to represent and present this. It’s not >> a bad idea to have the team associations in the repository so that we >> can present the data on the website and also use it with our tool

Re: Teams: first draft list

Liliana Marie Prikler writes: > Am Freitag, dem 01.07.2022 um 12:28 +0200 schrieb Ricardo Wurmus: >> [...] >> An example: >> >>    ./pre-inst-env guile --no-auto-compile -l etc/teams.scm -c '(cc r >> core)' >> >> This prints “git s

Teams: please add yourself to etc/teams.scm.in

Ricardo Wurmus writes: > Liliana Marie Prikler writes: > >> Am Freitag, dem 01.07.2022 um 12:28 +0200 schrieb Ricardo Wurmus: >>> [...] >>> An example: >>> >>>    ./pre-inst-env guile --no-auto-compile -l etc/teams.scm -c '(cc r >>

Reminder: please add yourself to a team

Hi Guix, please take the time to add an entry for yourself to etc/teams.scm.in in the Guix repository. Here’s an example commit: https://git.savannah.gnu.org/cgit/guix.git/commit/etc/teams.scm.in?id=47ed000d4df98e440a8a9a0788412b2f791b88b4 Thank you! -- Ricardo

Re: Broken lisp-fill-paragraph post Emacs 28 update

Hi Maxim, > The problem was introduced in commit 9bf367e1848, which aimed to improve > the handling of Elisp docstrings. To revert to the old version (the one > that shipped with Emacs 27), you can put this in your .emacs: > > (require 'lisp-mode) > (defun lisp-fill-paragraph (&optional justify

Re: “Building a Secure Software Supply Chain with GNU Guix”

Ludovic Courtès writes: >> My two cents: When depolying a manifest, we use `guix package -p >> -m `, This command consists two >> parts. Guix will first evaluate the packages specified in the manifest, >> and build the profile. And then populate the profile to given >> destination. The first p

gwl-0.5.0 released [stable]

We are pleased to announce the release of the GNU Guix Workflow Language version 0.5.0, representing 46 commits by two people, incorporating the results of productive discussions among a number of helpful people on the #guix and #guix-hpc IRC channels on libera.chat and on the gwl-de...@gnu.org ma

“guix system container” script must run as root

Hi Guix, I see that the container script generated by “guix system container” must be run as root. Looking at “initialize-user-namespace” in (gnu build linux-container) there is conditional code to be executed only when running as an unprivileged user, namely writing to /proc/pid/setgroups. This

Re: “guix system container” script must run as root

Ricardo Wurmus writes: > Hi Guix, > > I see that the container script generated by “guix system container” > must be run as root. Looking at “initialize-user-namespace” in (gnu > build linux-container) there is conditional code to be executed only > when running as an

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