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That would probably help. It is important that the names of the files match what the script is expecting.
Peace,
Matt.
From: levi solomyak <lsolom...@gmail.com>
Date: Friday, June 19, 2015 at 12:34 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] Diffusion Preprocessing Error Hello,
I am working on running the diffusion preprocessing pipeline using the script from https://github.com/Washington-University/Pipelines/blob/master/Examples/Scripts/DiffusionPreprocessingBatch.sh as
a reference.
When it is supposed to copy the positive raw data to the working directory I keep getting an ERROR: could not open file (for the imcp command). The files themselves are not corrupted, and imcp works, and I checked that
my StudyFolder path and EnvScript are correct. I am new to preprocessing HCP data so its very possible that I'm missing something basic.
Does anyone know how to fix this kind of issue? I would be happy to provide my script for reference.
Thank you so much!
Levi Solomyak
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- [HCP-Users] Diffusion Preprocessing Error levi solomyak
- Re: [HCP-Users] Diffusion Preprocessing Error Glasser, Matthew
