Re: [HCP-Users] FIRST on HCP strucs

[Glasser, Matthew]

Hopefully Mark or someone else at Oxford who uses FIRST a lot can help with this (not sure if Mark reads this list or not). Thanks, Matt. From: <hcp-users-boun...@humanconnectome.org> on behalf of Joseph Orr <joseph....@tamu.edu> Date: Wednesday, July 29, 2015 at 11:21 AM To: HCP Users <hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] FIRST on HCP strucs Sorry - sent prematurely.  Is there an advantage to using the -a flag with an existing struct to MNI registration?  I've had issues with a couple of subjects' segmentation and registration and am trying to debug the run_first_all steps. Thanks, Joe Joseph M. Orr, Ph.D. Assistant Professor Department of Psychology Texas A&M University College Station, TX On Wed, Jul 29, 2015 at 11:19 AM, Joseph Orr <joseph....@tamu.edu> wrote: I am running a FIRST vertex analysis on the T1w/T1w_acpc_dc_restore.nii.gz and just wanted to see if they were any recommended modifications with the HCP strucs, for instance, with the -m flag. Also, is it recommended to use the -a flag with  Joseph M. Orr, Ph.D. Assistant Professor Department of Psychology Texas A&M University College Station, TX _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users