Thanks for your response. The image is now cropped, image attached.
Leah.
***
Leah Moreno, PhD
Research Scientist
Division of Experimental Therapeutics
Department of Psychiatry
Columbia University Medical Center
1051 Riverside Drive, Unit 21
New York, NY
0 66 to include all slices and probably 0 1 for timepoints tacked onto the end.
Matt.
From: Marta Moreno mailto:mmorenoort...@icloud.com>>
Date: Sunday, March 24, 2019 at 9:54 PM
To: Matt Glasser mailto:glass...@wustl.edu>>
Cc: HCP Users
mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-U
Not negative.
Matt.
From: Marta Moreno mailto:mmorenoort...@icloud.com>>
Date: Sunday, March 24, 2019 at 9:45 PM
To: Matt Glasser mailto:glass...@wustl.edu>>
Cc: HCP Users
mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] Topup_AP dimension issue
Thanks for your response. Do you m
Thanks for your response. Do you mean running this?: fslroi
NTTMS_s037_181015_3T_SpinEchoFieldMap_AP_1.nii.gz test.nii.gz -16 96 -16 96 66
66
If that is the case the test file seams to be empty.
Leah.
> On Mar 24, 2019, at 8:25 PM, Glasser, Matthew wrote:
>
> Subtract 128 from 96 and then
Subtract 128 from 96 and then take half of that as your start and 96 as your
length.
Matt.
From:
mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of Marta Moreno
mailto:mmorenoort...@icloud.com>>
Date: Sunday, March 24, 2019 at 6:40 PM
To: HCP Users
mailto:hcp-users@humanconnectome.o
Dear Experts,
Maybe a trivial question but how can I change the Topup_AP dimension' size from
128 128 66 to 96 96 66? Using fslroi I am cutting the brain.
Thanks,
Leah.
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HCP-Users@humanconnectome.org
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Thanks so much!
Leah.
> On Mar 24, 2019, at 3:54 PM, Timothy Coalson wrote:
>
> The labels are used in the order of their keys, which is also how the
> exported label table is ordered. If your dlabel file has more label names
> than there ended up being parcels, you can first use
> -cifti-p
The labels are used in the order of their keys, which is also how the
exported label table is ordered. If your dlabel file has more label names
than there ended up being parcels, you can first use
-cifti-parcel-mapping-to-label to get a minimal dlabel file that exactly
matches the parcels mapping:
You can use wb_command -cifti-label-export-table or look inside the Workbench
GUI.
Matt.
From:
mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of Marta Moreno
mailto:mmorenoort...@icloud.com>>
Date: Sunday, March 24, 2019 at 11:59 AM
To: HCP Users
mailto:hcp-users@humanconnectome.or
Dear Experts,
If I create a ‘pconn.nii’ from each subject through the commands wb_command
-cifti-parcellate and -cifti-correlation to generate correlation matrix between
parcels (struct 360*360). How can I know which number in raw and column
correspond to parcel’s name in the dlabel.nii from
Q
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