If you copy parameters on the scanner and the Phase encoding direction
is different, the scanner will pop up a warning that it is reverting
the phase encoding direction (you then need to change the phase
encoding direction back). What I have done in the past to deal with
this is do it carefully
Since most of HCP has each diffusion scan run twice (once each) with
different phase encode directions, you could analyze each of those
separately (only using the B0s from the opposite phase encode
direction). Then perform whatever test-retest tests you are interested
in. Note, that you will end
Hi,
I have a few questions about gradunwarp.
* Is this tool going to be maintained and are you interested in
opening issues and pull requests (the github page does not have these
as options).
* This function does not work with mgz files. This is due to the calls
to fslval etc. (the data already
