Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

70b000) >libheimbase.so.1 => /usr/lib/x86_64-linux-gnu/libheimbase.so.1 >(0x7fafde4fc000) >libhx509.so.5 => /usr/lib/x86_64-linux-gnu/libhx509.so.5 >(0x7fafde2b1000) > libsqlite3.so.0 => /usr/lib/x86_64-linux-gnu/libsqlite3.so.0 >(0

Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

gt;On Macbook, it ran without these issues until the 'wb_command' problem. >> >>Kwan-Jin Jung, Ph.D. >>S230J, HMRC, Life Science Laboratories UMASS Amherst >>Office: 413-577-0538 >>Website: http://www.umass.edu/ials/hmrc >> >> >> >>-Original Mess

Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

-0538 >Website: http://www.umass.edu/ials/hmrc > > > > >-Original Message- >From: Glasser, Matthew [mailto:glass...@wustl.edu] >Sent: Friday, March 02, 2018 1:45 PM >To: Kwan-Jin Jung <kjj...@umass.edu>; hcp-users@humanconnectome.org >Subject: Re: [H

Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

- From: Glasser, Matthew [mailto:glass...@wustl.edu] Sent: Friday, March 02, 2018 1:45 PM To: Kwan-Jin Jung <kjj...@umass.edu>; hcp-users@humanconnectome.org Subject: Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS On Ubuntu 14.04 what happens if you do ldd mris_make_su

Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

h.D. >S230J, HMRC, Life Science Laboratories >UMASS Amherst >Office: 413-577-0538 >Website: http://www.umass.edu/ials/hmrc > > > >-Original Message- >From: Glasser, Matthew [mailto:glass...@wustl.edu] >Sent: Friday, March 02, 2018 11:16 AM >

Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

;kjj...@umass.edu>; hcp-users@humanconnectome.org Cc: Hae-Min Jung <hae-min.j...@austenriggs.net> Subject: Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS I¹m not sure we support the HCP Pipelines on Mac OS X. You definitely need to be using a bash interpreter. What

Re: [HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

I¹m not sure we support the HCP Pipelines on Mac OS X. You definitely need to be using a bash interpreter. What issues were you having on Ubuntu? Peace, Matt. On 3/2/18, 10:13 AM, "hcp-users-boun...@humanconnectome.org on behalf of Kwan-Jin Jung"

[HCP-Users] Change of FreeSurferHiresPial.sh for MacBook IOS

Hi, After I failed to run FreeSurfer pipeline on both Ubuntu and Centos, I tried it on MacBook. It runs without library issues, but it seems to have differences in shell scripting commands. The first example is ‘cp’ which needs to be replaced into ‘rsync’ in both FreeSurferHiresWhite.sh and