Re: [HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps

2017-08-03 Thread James Morrow
Thanks Tim and Matt for the detailed responses. I agree that mapping to volumes is sub-optimal. Our goal is to identify coords to be used as targets for brain stimulation with TMS. We need MNI coords for neuronavigation. Given the extent of the TMS field, we have some tolerance for imprecisions i

Re: [HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps

2017-08-02 Thread Timothy Coalson
On Wed, Aug 2, 2017 at 6:02 PM, James Morrow wrote: > Thanks Tim and Matt for the detailed responses. > > > I agree that mapping to volumes is sub-optimal. Our goal is to identify > coords to be used as targets for brain stimulation with TMS. We need MNI > coords for neuronavigation. Given the ex

Re: [HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps

2017-08-02 Thread Glasser, Matthew
bject: Re: [HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps Thanks Tim and Matt for the detailed responses. I agree that mapping to volumes is sub-optimal. Our goal is to identify coords to be used as targets for brain stimulation with TMS. We nee

Re: [HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps

2017-08-02 Thread Glasser, Matthew
manconnectome.org<mailto:hcp-users@humanconnectome.org>" mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps Hi, We have recently downloaded the HCP900 Parcellation + Timeseries + Netmats (820

[HCP-Users] Obtaining the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps

2017-08-02 Thread James Morrow
Hi, We have recently downloaded the HCP900 Parcellation + Timeseries + Netmats (820 Subjects) dataset. We would like to obtain the MNI coordinates of cluster peaks in the melodic_IC.dscalar.nii ICA maps. Is there any way to do this? Is the –cifti-extrema function of wb_command the correc